RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 PARLQ9H300 379 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 SH2D2AQ9NP31 389 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 RPRMQ9NS64 109 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 RNF115Q9Y4L5 304 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 ADAMTS20P59510 1910 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 ROBO1Q9Y6N7 1651 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 SHANK3Q9BYB0 1731 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 TRBV9A0A0B4J1U6 114 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 SPAARA0A1B0GVQ0 90 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 TCRBV7S2A1N4TA0A589 114 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 MANSC4A6NHS7 340 aaPredicted RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 MBD3L5A6NJ08 208 aaPredicted RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 FAM90A8PA6NJQ4 464 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 F8W1H4 67 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 H3BMH7 237 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 RER1O15258 196 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 EEF1E1O43324 174 aaKnown RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 NPIPB7O75200 414 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 KBTBD11O94819 623 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 CXCL1P09341 107 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 FAM90A13PP0C7W8 464 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 FAM90A24PP0C7X0 464 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 ZNF728P0DKX0 622 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 EPCAMP16422 314 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 EDN2P20800 178 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 PPIBP23284 216 aaKnown RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 PRTN3P24158 256 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 PYCR1P32322 319 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 TSFMP43897 325 aaKnown RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 CXCL12P48061 93 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 HINT1P49773 126 aaPredicted RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 CCL11P51671 97 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 DIO3P55073 304 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 FOXA1P55317 472 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 CYCSP99999 105 aaKnown RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 IL10RBQ08334 325 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 FOXL1Q12952 345 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 KLF9Q13886 244 aaPredicted RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 PAFAH1B3Q15102 231 aaKnown RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 C3AR1Q16581 482 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 DUSP5Q16690 384 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 FAM174BQ3ZCQ3 159 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 SPATA45Q537H7 98 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 TMEM196Q5HYL7 178 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 OR10J3Q5JRS4 329 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 AADACL3Q5VUY0 350 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 Q6Q795 121 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 DUX4L9Q6RFH8 374 aaPredicted RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 FAM19A5Q7Z5A7 132 aaPredicted RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 TMEM219Q86XT9 240 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 SLC35F2Q8IXU6 374 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 ZNF709Q8N972 641 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 ADAD2Q8NCV1 583 aaKnown RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 OR10V1Q8NGI7 309 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 OR52I1Q8NGK6 324 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 OR2K2Q8NGT1 345 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 OR6K6Q8NGW6 343 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 OR51E1Q8TCB6 317 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 SECTM1Q8WVN6 248 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 MSI2Q96DH6 328 aaKnown RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 NUS1Q96E22 293 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 OR4C12Q96R67 309 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 MRIQ9BWK5 157 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 FAM234AQ9H0X4 552 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 ZNF703Q9H7S9 590 aaPredicted RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 ST20Q9HBF5 79 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 NPVFQ9HCQ7 196 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 LIN7CQ9NUP9 197 aaKnown RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 KLHL13Q9P2N7 655 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 AK3Q9UIJ7 227 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 NOP16Q9Y3C1 178 aaKnown RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 PAM16Q9Y3D7 125 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 ZNF780BQ9Y6R6 833 aa5.29□□□□□ -1.56
TDP1-215ENST00000556498 COL22A1Q8NFW1 1626 aaPredicted RBP5.29□□□□□ -1.56
TDP1-215ENST00000556498 A0A1W2PR77 199 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 C9JAW5 83 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 TMEM262E9PQX1 116 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 GEMIN2O14893 280 aaKnown RBP5.28□□□□□ -1.56
TDP1-215ENST00000556498 PLPP2O43688 288 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 SYNGR1O43759 233 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 PRKNO60260 465 aaPredicted RBP5.28□□□□□ -1.56
TDP1-215ENST00000556498 NDUFB6O95139 128 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 SFT2D2O95562 160 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 CGAP01215 116 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 VIPP01282 170 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 CR2P20023 1033 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 NTF3P20783 257 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 CRYBB3P26998 211 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 DRD3P35462 400 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 NKX2-1P43699 371 aaPredicted RBP5.28□□□□□ -1.56
TDP1-215ENST00000556498 OR1E2P47887 323 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 TAS2R46P59540 309 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 TGIF1Q15583 401 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 TAL2Q16559 108 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 UBE2NLQ5JXB2 153 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 GLB1LQ6UWU2 654 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 CEACAM20Q6UY09 585 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 LINC00336Q6ZUF6 198 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 BHLHA9Q7RTU4 235 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 C1QL2Q7Z5L3 287 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms