RNA–Protein interactions for RNA: ENST00000553131.5

ERBB3-221, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-221ENST00000553131 ZNF266Q14584 549 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 ELOBQ15370 118 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 SP6Q3SY56 376 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.94□□□□□ -1.3
ERBB3-221ENST00000553131 LIAT1Q6ZQX7 453 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 C6orf201Q7Z4U5 140 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 LYZL2Q7Z4W2 148 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 LGI3Q8N145 548 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 HIST1H2BLQ99880 126 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 VDAC3Q9Y277 283 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 PHF3Q92576 2039 aaKnown RBP6.94□□□□□ -1.3
ERBB3-221ENST00000553131 MED19A0JLT2 244 aaPredicted RBP6.94□□□□□ -1.3
ERBB3-221ENST00000553131 ZNF850A8MQ14 1090 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 ZNF727A8MUV8 499 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 H3BML4 177 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 RER1O15258 196 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 CFIP05156 583 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 PGA4P0DJD7 388 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 PGA3P0DJD8 388 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 FCGR2AP12318 317 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 CDAP32320 146 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 ELLP55199 621 aaPredicted RBP6.94□□□□□ -1.3
ERBB3-221ENST00000553131 NKX6-1P78426 367 aaPredicted RBP6.94□□□□□ -1.3
ERBB3-221ENST00000553131 UBE2V2Q15819 145 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 PLPPR5Q32ZL2 321 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 TMEM240Q5SV17 173 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 OR2G3Q8NGZ4 309 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 RNASEH2CQ8TDP1 164 aaKnown RBP6.94□□□□□ -1.3
ERBB3-221ENST00000553131 Q8WTZ3 238 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 C18orf12Q96KH6 178 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 SYT3Q9BQG1 590 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 MAGT1Q9H0U3 335 aa6.94□□□□□ -1.3
ERBB3-221ENST00000553131 RCL1Q9Y2P8 373 aaKnown RBP6.94□□□□□ -1.3
ERBB3-221ENST00000553131 LAMTOR5O43504 91 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 WIPF1O43516 503 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 WDR1O75083 606 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 SCGB1D1O95968 90 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HPRT1P00492 218 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 TNFRSF1AP19438 455 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 SFTPDP35247 375 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 GFERP55789 205 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 FOXF1Q12946 379 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 DMRTC1Q5HYR2 192 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 C1orf194Q5T5A4 169 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 OR4P4Q8NGL7 312 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 PP6455Q8WZ26 134 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 ZDHHC16Q969W1 377 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 TVP23CQ96ET8 276 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 PNRC2Q9NPJ4 139 aaKnown RBP6.93□□□□□ -1.3
ERBB3-221ENST00000553131 KIAA1456Q9P272 454 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 TSSC4Q9Y5U2 329 aaPredicted RBP6.93□□□□□ -1.3
ERBB3-221ENST00000553131 FAM230AA0A1W2PPH8 454 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HSD17B6O14756 317 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HIST1H2BKO60814 126 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 DFFBO76075 338 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HIST1H2BJP06899 126 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 SRP19P09132 144 aaKnown RBP6.93□□□□□ -1.3
ERBB3-221ENST00000553131 CXCL1P09341 107 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 OMGP23515 440 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HIST1H2BOP23527 126 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HIST1H2BBP33778 126 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 FASLGP48023 281 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HIST1H2BDP58876 126 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 RND3P61587 244 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HIST1H2BCP62807 126 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 DLK1P80370 383 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 EWSR1Q01844 656 aaKnown RBP eCLIP6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HIST2H2BEQ16778 126 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 C5orf47Q569G3 176 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.93□□□□□ -1.3
ERBB3-221ENST00000553131 OR4A47Q6IF82 309 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 SLC25A47Q6Q0C1 308 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 ZNF429Q86V71 674 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HIST1H2BHQ93079 126 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 LIN37Q96GY3 246 aaPredicted RBP6.93□□□□□ -1.3
ERBB3-221ENST00000553131 EAF1Q96JC9 268 aaPredicted RBP6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HIST1H2BNQ99877 126 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HIST1H2BMQ99879 126 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 LILRA5A6NI73 299 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 METTL12A8MUP2 240 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 IGHV4-34P06331 123 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 OR4A8P0C604 315 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 FBLP22087 321 aaKnown RBP6.93□□□□□ -1.3
ERBB3-221ENST00000553131 CCL20P78556 96 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 MFAP5Q13361 173 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 SRSF7Q16629 238 aaKnown RBP eCLIP6.93□□□□□ -1.3
ERBB3-221ENST00000553131 C9orf50Q5SZB4 431 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 ZNF343Q6P1L6 599 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 CRIP3Q6Q6R5 217 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 SLC35G3Q8N808 338 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 BADQ92934 168 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 NIPSNAP3BQ9BS92 247 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 HDHD3Q9BSH5 251 aaPredicted RBP6.93□□□□□ -1.3
ERBB3-221ENST00000553131 LRRC61Q9BV99 259 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 AK3Q9UIJ7 227 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 PILRBQ9UKJ0 227 aa6.93□□□□□ -1.3
ERBB3-221ENST00000553131 NXT1Q9UKK6 140 aaKnown RBP6.93□□□□□ -1.3
ERBB3-221ENST00000553131 TRAV30A0A087WSZ9 112 aa6.92□□□□□ -1.3
ERBB3-221ENST00000553131 TRAV39A0A0B4J263 110 aa6.92□□□□□ -1.3
ERBB3-221ENST00000553131 DHRS3O75911 302 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms