RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 RRAS2P62070 204 aaPredicted RBP5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 TNFAIP6P98066 277 aaPredicted RBP5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 CBX3Q13185 183 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 PAN3Q58A45 887 aaKnown RBP5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 TMEM255AQ5JRV8 349 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 CD276Q5ZPR3 534 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 FAHD2BQ6P2I3 314 aaPredicted RBP5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 C1orf87Q8N0U7 546 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 GVQW1Q8N7I0 195 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 OR6F1Q8NGZ6 308 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 ZFAND1Q8TCF1 268 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 GIMAP1Q8WWP7 306 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 FAHD2AQ96GK7 314 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 SYT3Q9BQG1 590 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 NRIP2Q9BQI9 281 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 SUCNR1Q9BXA5 334 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 ALX4Q9H161 411 aaPredicted RBP5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 TLNRD1Q9H1K6 362 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 OR51J1Q9H342 316 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 MS4A5Q9H3V2 200 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 UNKLQ9H9P5 680 aaKnown RBP5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 MSL2Q9HCI7 577 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 RAB9BQ9NP90 201 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 DYNLRB1Q9NP97 96 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 ESM1Q9NQ30 184 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 DECR2Q9NUI1 292 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 C1orf123Q9NWV4 160 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 EHFQ9NZC4 300 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 RCC2Q9P258 522 aaKnown RBP5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 DNAJB11Q9UBS4 358 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 IL19Q9UHD0 177 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 AK3Q9UIJ7 227 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 ANXA10Q9UJ72 324 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 ZNF221Q9UK13 617 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 C14orf166Q9Y224 244 aaKnown RBP5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 PPIAL4AQ9Y536 164 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 NPTNQ9Y639 398 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 PIGBOS1A0A0B4J2F0 54 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 C7orf66A4D0T2 115 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 B4DSR2 109 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 B9A039 149 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 H0YL77 283 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 M0R233 179 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 MLNRO43193 412 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 SNAPC5O75971 98 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 DIRAS3O95661 229 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 PTBP3O95758 552 aaKnown RBP5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 HAND1O96004 215 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 RPLP1P05386 114 aaKnown RBP5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 FCGR3AP08637 254 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 OR4A8P0C604 315 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 PGAM2P15259 253 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 SERPINF1P36955 418 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 CFHR2P36980 270 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 MECP2P51608 486 aaKnown RBP5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 ERVK11-1P61568 191 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 HERV-K104P61576 105 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 UBA52P62987 128 aaKnown RBP5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 FOXL1Q12952 345 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 MAB21L1Q13394 359 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 ZNF146Q15072 292 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 SURF2Q15527 256 aaPredicted RBP5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 SWI5Q1ZZU3 235 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 MST1LQ2TV78 715 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 ALKBH6Q3KRA9 238 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 C4orf46Q504U0 113 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 OR52W1Q6IF63 320 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 LPCAT3Q6P1A2 487 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 TRAT1Q6PIZ9 186 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 GLDNQ6ZMI3 551 aaPredicted RBP5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 Q6ZS49 121 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 C1QL4Q86Z23 238 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 SUMF2Q8NBJ7 301 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 OR4S1Q8NGB4 309 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 TERB2Q8NHR7 220 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 LRRC29Q8WV35 223 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 ASB13Q8WXK3 278 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 C22orf15Q8WYQ4 148 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 TMEM186Q96B77 213 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 DUX5Q96PT3 197 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 OR2V2Q96R30 315 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 SULT4A1Q9BR01 284 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 DPCDQ9BVM2 203 aaPredicted RBP5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 MRPL37Q9BZE1 423 aaKnown RBP5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 TINAGL1Q9GZM7 467 aaPredicted RBP5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 FGF23Q9GZV9 251 aaPredicted RBP5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 SEBOXQ9HB31 216 aaPredicted RBP5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 KCNIP1Q9NZI2 227 aa5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 ELF5Q9UKW6 265 aaPredicted RBP5.92□□□□□ -1.46
DEPDC4-208ENST00000549341 TRBV6-6A0A0A6YYG2 114 aa5.91□□□□□ -1.46
DEPDC4-208ENST00000549341 TMEM30CPA0ZSE6 113 aa5.91□□□□□ -1.46
DEPDC4-208ENST00000549341 C17orf100A8MU93 164 aa5.91□□□□□ -1.46
DEPDC4-208ENST00000549341 TRDCB7Z8K6 153 aa5.91□□□□□ -1.46
DEPDC4-208ENST00000549341 LYNX1G3V0Z9 82 aa5.91□□□□□ -1.46
DEPDC4-208ENST00000549341 RHBDL1O75783 438 aa5.91□□□□□ -1.46
DEPDC4-208ENST00000549341 TK1P04183 234 aa5.91□□□□□ -1.46
DEPDC4-208ENST00000549341 MSMBP08118 114 aa5.91□□□□□ -1.46
DEPDC4-208ENST00000549341 CD55P08174 381 aa5.91□□□□□ -1.46
DEPDC4-208ENST00000549341 ADH4P08319 380 aa5.91□□□□□ -1.46
DEPDC4-208ENST00000549341 LYNX1P0DP58 116 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms