RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 LRFN1Q9P244 771 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 MRPS18CQ9Y3D5 142 aaKnown RBP7.48□□□□□ -1.21
TDP1-204ENST00000545686 VCANP13611 3396 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 C9J4A7 227 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 G3V3Y1 287 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 DEGS1O15121 323 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 CYTIPO60759 359 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 SERPINE2P07093 398 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 COX5BP10606 129 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 MDH2P40926 338 aaKnown RBP7.47□□□□□ -1.21
TDP1-204ENST00000545686 LBHQ53QV2 105 aaPredicted RBP7.47□□□□□ -1.21
TDP1-204ENST00000545686 TMEM41BQ5BJD5 291 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 GFI1BQ5VTD9 330 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 ZNF324BQ6AW86 544 aaPredicted RBP7.47□□□□□ -1.21
TDP1-204ENST00000545686 SPEM1Q8N4L4 309 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 ZNF525Q8N782 197 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 AGBL5Q8NDL9 886 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 MRPL30Q8TCC3 161 aaKnown RBP7.47□□□□□ -1.21
TDP1-204ENST00000545686 RNASEH2CQ8TDP1 164 aaKnown RBP7.47□□□□□ -1.21
TDP1-204ENST00000545686 PACRGQ96M98 296 aaPredicted RBP7.47□□□□□ -1.21
TDP1-204ENST00000545686 PHF7Q9BWX1 381 aaPredicted RBP7.47□□□□□ -1.21
TDP1-204ENST00000545686 OCIAD1Q9NX40 245 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 OR14J1Q9UGF5 321 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 SDK2Q58EX2 2172 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 KMT2EQ8IZD2 1858 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 A0A0G2JRQ6 117 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 SMCO3A2RU48 225 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 ZFP92A6NM28 416 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 SYNGR2O43760 224 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 CXCL13O43927 109 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 FABP4P15090 132 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 DDTP30046 118 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 TMEM267Q0VDI3 215 aaPredicted RBP7.47□□□□□ -1.21
TDP1-204ENST00000545686 GAMTQ14353 236 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 ZNF726P1Q15940 193 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 LRRC75BQ2VPJ9 315 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 TGIF2LYQ8IUE0 185 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 TMEM183AQ8IXX5 376 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 OR10A7Q8NGE5 316 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 OR10D3Q8NH80 312 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 OR10J5Q8NHC4 309 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 NEK7Q8TDX7 302 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 CLDN23Q96B33 292 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 HIST1H2BLQ99880 126 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 PYGO2Q9BRQ0 406 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 LINC00470Q9BZP3 86 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 SRD5A3Q9H8P0 318 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 NAT8Q9UHE5 227 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 TIMM9Q9Y5J7 89 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 CNTRLQ7Z7A1 2325 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 ARHGAP21Q5T5U3 1957 aa7.47□□□□□ -1.21
TDP1-204ENST00000545686 MKRN2OSH3BPM6 223 aa7.46□□□□□ -1.21
TDP1-204ENST00000545686 DVL1O14640 695 aa7.46□□□□□ -1.21
TDP1-204ENST00000545686 SS18L1O75177 396 aaPredicted RBP7.46□□□□□ -1.21
TDP1-204ENST00000545686 KLF7O75840 302 aaPredicted RBP7.46□□□□□ -1.21
TDP1-204ENST00000545686 P04436 131 aa7.46□□□□□ -1.21
TDP1-204ENST00000545686 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.21
TDP1-204ENST00000545686 ZNF468Q5VIY5 522 aaPredicted RBP7.46□□□□□ -1.21
TDP1-204ENST00000545686 WDR25Q64LD2 544 aaPredicted RBP7.46□□□□□ -1.21
TDP1-204ENST00000545686 CYP2G1PQ6ZSU1 146 aa7.46□□□□□ -1.21
TDP1-204ENST00000545686 MOB1BQ7L9L4 216 aa7.46□□□□□ -1.21
TDP1-204ENST00000545686 YRDCQ86U90 279 aaKnown RBP7.46□□□□□ -1.21
TDP1-204ENST00000545686 CPEB3Q8NE35 698 aaKnown RBP7.46□□□□□ -1.21
TDP1-204ENST00000545686 OR2Y1Q8NGV0 311 aa7.46□□□□□ -1.21
TDP1-204ENST00000545686 RNASE11Q8TAA1 199 aaKnown RBP7.46□□□□□ -1.21
TDP1-204ENST00000545686 ZNF845Q96IR2 970 aaPredicted RBP7.46□□□□□ -1.21
TDP1-204ENST00000545686 GPHA2Q96T91 129 aa7.46□□□□□ -1.21
TDP1-204ENST00000545686 RSG1Q9BU20 258 aa7.46□□□□□ -1.21
TDP1-204ENST00000545686 STRADBQ9C0K7 418 aa7.46□□□□□ -1.21
TDP1-204ENST00000545686 FGF23Q9GZV9 251 aaPredicted RBP7.46□□□□□ -1.21
TDP1-204ENST00000545686 MTCH1Q9NZJ7 389 aa7.46□□□□□ -1.21
TDP1-204ENST00000545686 CCDC163A0A0D9SF12 145 aa7.46□□□□□ -1.22
TDP1-204ENST00000545686 FAM90A26D6RGX4 464 aa7.46□□□□□ -1.22
TDP1-204ENST00000545686 H3BP45 60 aa7.46□□□□□ -1.22
TDP1-204ENST00000545686 NXPH3O95157 252 aa7.46□□□□□ -1.22
TDP1-204ENST00000545686 GPM6AP51674 278 aa7.46□□□□□ -1.22
TDP1-204ENST00000545686 MRPL21Q7Z2W9 205 aaKnown RBP7.46□□□□□ -1.22
TDP1-204ENST00000545686 OR5A2Q8NGI9 324 aa7.46□□□□□ -1.22
TDP1-204ENST00000545686 APOBEC3DQ96AK3 386 aaPredicted RBP7.46□□□□□ -1.22
TDP1-204ENST00000545686 LIN7CQ9NUP9 197 aaKnown RBP7.46□□□□□ -1.22
TDP1-204ENST00000545686 SDK1Q7Z5N4 2213 aa7.46□□□□□ -1.22
TDP1-204ENST00000545686 ZNF407Q9C0G0 2248 aa7.46□□□□□ -1.22
TDP1-204ENST00000545686 IGKV3D-15A0A087WSY6 115 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 MAP1LC3B2A6NCE7 125 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 CD300LBA8K4G0 201 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 TNFSF12O43508 249 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 HLA-HP01893 362 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 PSG2P11465 335 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 JOSD1Q15040 202 aaPredicted RBP7.45□□□□□ -1.22
TDP1-204ENST00000545686 NCR3LG1Q68D85 454 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 TCEAL6Q6IPX3 200 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 LCN15Q6UWW0 184 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 SSX9Q7RTT3 188 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 CENPVQ7Z7K6 275 aaPredicted RBP7.45□□□□□ -1.22
TDP1-204ENST00000545686 BATF2Q8N1L9 274 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 OR10V1Q8NGI7 309 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 SAP25Q8TEE9 199 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 PSMF1Q92530 271 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 MAP1LC3BQ9GZQ8 125 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 WDR61Q9GZS3 305 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms