RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 ZNF581Q9P0T4 197 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 ARHGAP32A7KAX9 2087 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 TRAV40A0A0B4J280 105 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 INAFM1C9JVW0 142 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 F2RL2O00254 374 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 SULT1C2O00338 296 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 TOR1AO14656 332 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 MRPS10P82664 201 aaKnown RBP14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 PLA2G7Q13093 441 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 C17orf58Q2M2W7 97 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 MOGAT2Q3SYC2 334 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 LY6G6FQ5SQ64 297 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 TCF23Q7RTU1 214 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 C8orf31Q8N9H6 132 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 CCDC107Q8WV48 283 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 LHX4Q969G2 390 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 CLEC7AQ9BXN2 247 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 SLIRPQ9GZT3 109 aaKnown RBP14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 NXF2Q9GZY0 626 aaKnown RBP14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 AUNIPQ9H7T9 357 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 SCPEP1Q9HB40 452 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 TAF9BQ9HBM6 251 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 Q9N2K0 584 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 SIRT7Q9NRC8 400 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 JPT1Q9UK76 154 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 KCNK7Q9Y2U2 307 aa14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 TBL2Q9Y4P3 447 aaKnown RBP14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 AMMECR1Q9Y4X0 333 aaPredicted RBP14.34□□□□□ -0.11
CLSTN3-210ENST00000540931 A0A0A6YYJ9 748 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 CENPVL3A0A0U1RRI6 287 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 TRDCB7Z8K6 153 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 AVPP01185 164 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 CEACAM3P40198 252 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 ARHGDIBP52566 201 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 HMGN3Q15651 99 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 MINOS1Q5TGZ0 78 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 RBMS3Q6XE24 437 aaKnown RBP14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 BEND2Q8NDZ0 799 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 OR4A4PQ8NGN8 299 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 SETD6Q8TBK2 473 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 DYRK2Q92630 601 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 KIRREL1Q96J84 757 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 JMJD8Q96S16 334 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 C6orf62Q9GZU0 229 aaPredicted RBP14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 ZNF286AQ9HBT8 521 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 MINOS1-NBL1R4GNA1 71 aa14.33□□□□□ -0.12
CLSTN3-210ENST00000540931 C12orf77C9JDV5 145 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 C15orf65H3BRN8 121 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 HPGDSO60760 199 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 LPLP06858 475 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 RCC1P18754 421 aaPredicted RBP14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 ELK1P19419 428 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 EPHA1P21709 976 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 ZBTB25P24278 435 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 PRSS3P35030 304 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 C1orf229Q6ZS94 237 aaPredicted RBP14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 ABHD12Q8N2K0 398 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 OR9G1Q8NH87 305 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 OCSTAMPQ9BR26 566 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 SUCNR1Q9BXA5 334 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 FAM96BQ9Y3D0 163 aa14.32□□□□□ -0.12
CLSTN3-210ENST00000540931 IGHV2-26A0A0B4J1V2 119 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 TMEM235A6NFC5 223 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 RNASEK-C17orf49H0YIS7 233 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 SDCBPO00560 298 aaPredicted RBP14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 NPFFO15130 113 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 HBZP02008 142 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 FCGR3AP08637 254 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 IL3RAP26951 378 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 SSTR5P35346 364 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 TAS2R20P59543 309 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 HLA-DRB3P79483 266 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 ZNF626Q68DY1 528 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 LINC00299Q6ZSB3 139 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 ZNF418Q8TF45 676 aaPredicted RBP14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 EDARADDQ8WWZ3 215 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 DCUN1D5Q9BTE7 237 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 ZMAT3Q9HA38 289 aaKnown RBP14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 OR2S2Q9NQN1 319 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 GFOD1Q9NXC2 390 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 GNG12Q9UBI6 72 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 EXTL2Q9UBQ6 330 aa14.31□□□□□ -0.12
CLSTN3-210ENST00000540931 SONP18583 2426 aaKnown RBP14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 A6NHS1 94 aa14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 OOSP1A8MZH6 123 aa14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 ITGB1BP1O14713 200 aa14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 YPEL1O60688 119 aa14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 EIF4EP06730 217 aaKnown RBP14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 FBP1P09467 338 aa14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 NFYBP25208 207 aa14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 PTBP1P26599 531 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 KLF17Q5JT82 389 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 PRAMEF5Q5TYX0 476 aa14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 ZNF782Q6ZMW2 699 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 PNKDQ8N490 385 aa14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 MALSU1Q96EH3 234 aa14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 DIRAS2Q96HU8 199 aa14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 YPEL2Q96QA6 119 aa14.3□□□□□ -0.12
CLSTN3-210ENST00000540931 MXRA5Q9NR99 2828 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 KIAA2026Q5HYC2 2103 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms