RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 GDF1P27539 372 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 OTX2P32243 289 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 HIST1H2BBP33778 126 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 CD200P41217 278 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 HIST1H2BDP58876 126 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 HIST1H2BCP62807 126 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 HIST2H2BEQ16778 126 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 PYY3Q5JQD4 70 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.48□□□□□ -0.73
NPC1-202ENST00000540608 C20orf204Q6ZNR8 217 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 PPP1R32Q7Z5V6 425 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 LINC00469Q8N7U9 141 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 HIST1H2BHQ93079 126 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 APOBEC3DQ96AK3 386 aaPredicted RBP10.48□□□□□ -0.73
NPC1-202ENST00000540608 HIST1H2BNQ99877 126 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 HIST1H2BMQ99879 126 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 PRDM6Q9NQX0 595 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 CISD1Q9NZ45 108 aaKnown RBP10.48□□□□□ -0.73
NPC1-202ENST00000540608 SEC14L6B5MCN3 397 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 CYB5BO43169 146 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 SERPINE2P07093 398 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 WNT2P09544 360 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 COX5BP10606 129 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 CCL2P13500 99 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 SLC25A24Q6NUK1 477 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 OR10J5Q8NHC4 309 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 HIST1H2AAQ96QV6 131 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 PRRG4Q9BZD6 226 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 TMEM242Q9NWH2 141 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 GNG13Q9P2W3 67 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 A0A096LPE4 126 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 TRBV23-1A0A0A0MS06 115 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 A0A1W2PPZ6 126 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 GATCO43716 136 aaKnown RBP10.48□□□□□ -0.73
NPC1-202ENST00000540608 SYNGR1O43759 233 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 F10P00742 488 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 OR2B11Q5JQS5 317 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 FAM90A2PQ658T7 463 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 ZNF880Q6PDB4 577 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 SCGB1C1Q8TD33 95 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 MBD3L1Q8WWY6 194 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 RPRMQ9NS64 109 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 PINLYPA6NC86 204 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 ZNF729A6NN14 1252 aaPredicted RBP10.47□□□□□ -0.73
NPC1-202ENST00000540608 H3BP45 60 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 ATXN7O15265 892 aaPredicted RBP10.47□□□□□ -0.73
NPC1-202ENST00000540608 ZNHIT1O43257 154 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 SS18L1O75177 396 aaPredicted RBP10.47□□□□□ -0.73
NPC1-202ENST00000540608 CNOT4O95628 575 aaKnown RBP10.47□□□□□ -0.73
NPC1-202ENST00000540608 HLA-HP01893 362 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 TRGC2P03986 189 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 PSG2P11465 335 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 DUSP3P51452 185 aaPredicted RBP10.47□□□□□ -0.73
NPC1-202ENST00000540608 TMEM267Q0VDI3 215 aaPredicted RBP10.47□□□□□ -0.73
NPC1-202ENST00000540608 PNRC1Q12796 327 aaPredicted RBP10.47□□□□□ -0.73
NPC1-202ENST00000540608 SPNS3Q6ZMD2 512 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 UBALD2Q8IYN6 164 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 PSMF1Q92530 271 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 ERRFI1Q9UJM3 462 aaPredicted RBP10.47□□□□□ -0.73
NPC1-202ENST00000540608 HS3ST1O14792 307 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 CYB561P49447 251 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 RAB11AP62491 216 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 C9orf135Q5VTT2 229 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 Q6ZRM9 215 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 OR51H1Q8NH63 302 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 LSM10Q969L4 123 aaKnown RBP10.47□□□□□ -0.73
NPC1-202ENST00000540608 ZNF552Q9H707 407 aaPredicted RBP10.47□□□□□ -0.73
NPC1-202ENST00000540608 TREM2Q9NZC2 230 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 RNF150Q9ULK6 438 aa10.47□□□□□ -0.73
NPC1-202ENST00000540608 TNRC6AQ8NDV7 1962 aaKnown RBP10.46□□□□□ -0.73
NPC1-202ENST00000540608 PCSK5Q92824 1860 aa10.46□□□□□ -0.73
NPC1-202ENST00000540608 TRAV24A0A0B4J272 114 aa10.46□□□□□ -0.73
NPC1-202ENST00000540608 BCL2P10415 239 aa10.46□□□□□ -0.73
NPC1-202ENST00000540608 RND2P52198 227 aa10.46□□□□□ -0.73
NPC1-202ENST00000540608 ACSF3Q4G176 576 aaPredicted RBP10.46□□□□□ -0.73
NPC1-202ENST00000540608 PEAR1Q5VY43 1037 aaPredicted RBP10.46□□□□□ -0.73
NPC1-202ENST00000540608 ZNF787Q6DD87 383 aa10.46□□□□□ -0.73
NPC1-202ENST00000540608 OR5P3Q8WZ94 311 aa10.46□□□□□ -0.73
NPC1-202ENST00000540608 PSMG3Q9BT73 122 aaPredicted RBP10.46□□□□□ -0.73
NPC1-202ENST00000540608 CABLES2Q9BTV7 478 aa10.46□□□□□ -0.73
NPC1-202ENST00000540608 RSG1Q9BU20 258 aa10.46□□□□□ -0.73
NPC1-202ENST00000540608 SMOC1Q9H4F8 434 aa10.46□□□□□ -0.73
NPC1-202ENST00000540608 OPA3Q9H6K4 179 aa10.46□□□□□ -0.73
NPC1-202ENST00000540608 ELOA3CA0A087WX78 387 aaPredicted RBP10.46□□□□□ -0.74
NPC1-202ENST00000540608 LRP5LA4QPB2 252 aa10.46□□□□□ -0.74
NPC1-202ENST00000540608 SYNGR2O43760 224 aa10.46□□□□□ -0.74
NPC1-202ENST00000540608 NGFP01138 241 aa10.46□□□□□ -0.74
NPC1-202ENST00000540608 FAM210BQ96KR6 192 aa10.46□□□□□ -0.74
NPC1-202ENST00000540608 IER2Q9BTL4 223 aa10.46□□□□□ -0.74
NPC1-202ENST00000540608 ZNF503-AS2A6NEH8 195 aa10.45□□□□□ -0.74
NPC1-202ENST00000540608 ZFP92A6NM28 416 aa10.45□□□□□ -0.74
NPC1-202ENST00000540608 CD300LBA8K4G0 201 aa10.45□□□□□ -0.74
NPC1-202ENST00000540608 TGOLN2O43493 480 aa10.45□□□□□ -0.74
NPC1-202ENST00000540608 CER1O95813 267 aa10.45□□□□□ -0.74
NPC1-202ENST00000540608 CYB5R3P00387 301 aaPredicted RBP10.45□□□□□ -0.74
NPC1-202ENST00000540608 NKX6-1P78426 367 aaPredicted RBP10.45□□□□□ -0.74
NPC1-202ENST00000540608 ZNF726P1Q15940 193 aa10.45□□□□□ -0.74
NPC1-202ENST00000540608 IZUMO4Q1ZYL8 232 aa10.45□□□□□ -0.74
NPC1-202ENST00000540608 OR10V1Q8NGI7 309 aa10.45□□□□□ -0.74
NPC1-202ENST00000540608 RNASE11Q8TAA1 199 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms