RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 TMEM128Q5BJH2 165 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 LY6G6FQ5SQ64 297 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 TMEM185AQ8NFB2 350 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 ELMOD3Q96FG2 381 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 OBP2BQ9NPH6 170 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 M0QZK8 103 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 SYNGR1O43759 233 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 ZNF205O95201 554 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 HLA-GP17693 338 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 OPRM1P35372 400 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 ECI1P42126 302 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 RAB5CP51148 216 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 AKR1C2P52895 323 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 AKR1C1Q04828 323 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 IL24Q13007 206 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 MPV17LQ2QL34 196 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 FAM180AQ6UWF9 173 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 SPACA3Q8IXA5 215 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 OR1J1Q8NGS3 322 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 SLC25A40Q8TBP6 338 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 RTL8AQ9BWD3 113 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 PKIBQ9C010 78 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 ZNF442Q9H7R0 627 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 ZNF71Q9NQZ8 489 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-212ENST00000540304 NECAP2Q9NVZ3 263 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 OR5H14A6NHG9 310 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 F8VVB4 439 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 F8VWA3 439 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 CCSO14618 274 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 AGFG2O95081 481 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 CTXN2P0C2S0 81 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 PPP3CBP16298 524 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 PI3P19957 117 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 ERVS71-1P61550 626 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 SRSF4Q08170 494 aaKnown RBP8.22□□□□□ -1.09
CLIP1-212ENST00000540304 LCE2DQ5TA82 110 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-212ENST00000540304 TMEM211Q6ICI0 200 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 UNQ6126/PRO20091Q6UXV3 157 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 BHLHA15Q7RTS1 189 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-212ENST00000540304 LINC00596Q86U02 117 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 BOLLQ8N9W6 283 aaKnown RBP8.22□□□□□ -1.09
CLIP1-212ENST00000540304 RELL2Q8NC24 303 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-212ENST00000540304 CASTOR1Q8WTX7 329 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 TMEM230Q96A57 120 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 TXN2Q99757 166 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 RTBDNQ9BSG5 229 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-212ENST00000540304 OR51I2Q9H344 312 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 PLK3Q9H4B4 646 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 PRR13Q9NZ81 148 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 FAM215AQ9Y5M1 114 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 XKRY2A2RUG3 117 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 IQCF6A8MYZ5 107 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 B9A039 149 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 J3QT63 122 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 SPDEFO95238 335 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 OR5H8P0DN80 308 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 SELEP16581 610 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 C4BPBP20851 252 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 NFYAP23511 347 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-212ENST00000540304 S100A2P29034 98 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 C5orf24Q7Z6I8 188 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 MRGPRDQ8TDS7 321 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 EXTL1Q92935 676 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 ABHD17AQ96GS6 310 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 ZNF2Q9BSG1 426 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-212ENST00000540304 ZNF286AQ9HBT8 521 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 RCC2Q9P258 522 aaKnown RBP8.22□□□□□ -1.09
CLIP1-212ENST00000540304 RELNP78509 3460 aa8.22□□□□□ -1.09
CLIP1-212ENST00000540304 TEX13DA0A0J9YY54 714 aaPredicted RBP8.21□□□□□ -1.09
CLIP1-212ENST00000540304 HMSDA8MTL9 139 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 SFT2D2O95562 160 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 IGLV1-44P01699 117 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 CD8AP01732 235 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 SNRNP70P08621 437 aaKnown RBP8.21□□□□□ -1.09
CLIP1-212ENST00000540304 RCC1P18754 421 aaPredicted RBP8.21□□□□□ -1.09
CLIP1-212ENST00000540304 CALCRP30988 508 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 PRRX1P54821 245 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 UBE2G2P60604 165 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 SEC61A1P61619 476 aaKnown RBP8.21□□□□□ -1.09
CLIP1-212ENST00000540304 NHLH1Q02575 133 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 ZNF660Q6AZW8 331 aaPredicted RBP8.21□□□□□ -1.09
CLIP1-212ENST00000540304 SLC22A25Q6T423 547 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 BEND2Q8NDZ0 799 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 OR10D4PQ8NGN7 298 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 HS3ST6Q96QI5 342 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 RHOFQ9HBH0 211 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 GSKIPQ9P0R6 139 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 C14orf166Q9Y224 244 aaKnown RBP8.21□□□□□ -1.09
CLIP1-212ENST00000540304 AMDHD2Q9Y303 409 aa8.21□□□□□ -1.09
CLIP1-212ENST00000540304 LRP5LA4QPB2 252 aa8.21□□□□□ -1.1
CLIP1-212ENST00000540304 OR5H1A6NKK0 313 aa8.21□□□□□ -1.1
CLIP1-212ENST00000540304 SIAH2O43255 324 aa8.21□□□□□ -1.1
CLIP1-212ENST00000540304 GFRA3O60609 400 aa8.21□□□□□ -1.1
CLIP1-212ENST00000540304 CECR9P0C854 216 aa8.21□□□□□ -1.1
CLIP1-212ENST00000540304 PGAM2P15259 253 aa8.21□□□□□ -1.1
CLIP1-212ENST00000540304 TIMP3P35625 211 aa8.21□□□□□ -1.1
CLIP1-212ENST00000540304 OR2B8PP59922 312 aa8.21□□□□□ -1.1
CLIP1-212ENST00000540304 HTD2P86397 168 aa8.21□□□□□ -1.1
CLIP1-212ENST00000540304 SORDQ00796 357 aa8.21□□□□□ -1.1
CLIP1-212ENST00000540304 PSG7Q13046 419 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 592.2 ms