RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 J3QR06 171 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 PDE6DO43924 150 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 LMX1BO60663 402 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 ZNF737O75373 536 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 NXPH2O95156 264 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 KLF8O95600 359 aaPredicted RBP5.75□□□□□ -1.49
USP28-207ENST00000538475 NRASP01111 189 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 KRASP01116 189 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 PDGFBP01127 241 aaPredicted RBP5.75□□□□□ -1.49
USP28-207ENST00000538475 MT-ND6P03923 174 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 HNRNPA1P09651 372 aaKnown RBP eCLIP5.75□□□□□ -1.49
USP28-207ENST00000538475 FKBP2P26885 142 aaKnown RBP5.75□□□□□ -1.49
USP28-207ENST00000538475 PPP1CBP62140 327 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 NFATC4Q14934 902 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 P2RY6Q15077 328 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 LRRC75BQ2VPJ9 315 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 PLPPR5Q32ZL2 321 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 SLC25A24Q6NUK1 477 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 C19orf35Q6ZS72 473 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 OOSP2Q86WS3 158 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 C1orf174Q8IYL3 243 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 SELENOHQ8IZQ5 122 aaKnown RBP5.75□□□□□ -1.49
USP28-207ENST00000538475 OR5AU1Q8NGC0 362 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 OR51E1Q8TCB6 317 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 TMEM171Q8WVE6 324 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 LSM10Q969L4 123 aaKnown RBP5.75□□□□□ -1.49
USP28-207ENST00000538475 FAM131CQ96AQ9 280 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 SMIM12Q96EX1 92 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 NEIL1Q96FI4 390 aaPredicted RBP5.75□□□□□ -1.49
USP28-207ENST00000538475 CIB3Q96Q77 187 aaPredicted RBP5.75□□□□□ -1.49
USP28-207ENST00000538475 GAL3ST4Q96RP7 486 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 NKX3-1Q99801 234 aaPredicted RBP5.75□□□□□ -1.49
USP28-207ENST00000538475 ABHD14AQ9BUJ0 271 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 APOOQ9BUR5 198 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 RPRMQ9NS64 109 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 ZNF701Q9NV72 531 aaPredicted RBP5.75□□□□□ -1.49
USP28-207ENST00000538475 THAP10Q9P2Z0 257 aaPredicted RBP5.75□□□□□ -1.49
USP28-207ENST00000538475 ZNF391Q9UJN7 358 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 UBE2J1Q9Y385 318 aaPredicted RBP5.75□□□□□ -1.49
USP28-207ENST00000538475 LY96Q9Y6Y9 160 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 SPAG17Q6Q759 2223 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 LOC102725191A0A1B0GVB3 256 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 NKX2-6A6NCS4 301 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 LIPT2A6NK58 231 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 ZFP92A6NM28 416 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 H0Y980 276 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 MS4A18H0YCH9 400 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 DEGS1O15121 323 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 PHF1O43189 567 aaPredicted RBP5.74□□□□□ -1.49
USP28-207ENST00000538475 MLNRO43193 412 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 HCRTR1O43613 425 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 DHRS3O75911 302 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 CNOT4O95628 575 aaKnown RBP5.74□□□□□ -1.49
USP28-207ENST00000538475 DDAH2O95865 285 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 PLA2G1BP04054 148 aaKnown RBP5.74□□□□□ -1.49
USP28-207ENST00000538475 MMP7P09237 267 aaPredicted RBP5.74□□□□□ -1.49
USP28-207ENST00000538475 CTSEP14091 401 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 GZMHP20718 246 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 CTRLP40313 264 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 OR1D4P47884 311 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 RHOGP84095 191 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 TLE3Q04726 772 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 MSMO1Q15800 293 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 PMCHL1Q16048 86 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 PRTGQ2VWP7 1150 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 MS4A18Q3C1V0 323 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 DGAT2L6Q6ZPD8 337 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 ABHD12BQ7Z5M8 362 aaPredicted RBP5.74□□□□□ -1.49
USP28-207ENST00000538475 TMEM123Q8N131 208 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 CPEB3Q8NE35 698 aaKnown RBP5.74□□□□□ -1.49
USP28-207ENST00000538475 NUDT10Q8NFP7 164 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 OR8B12Q8NGG6 310 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 OR5D18Q8NGL1 313 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 OR10S1Q8NGN2 331 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 C11orf40Q8WZ69 217 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 OR5P3Q8WZ94 311 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 FAM3CQ92520 227 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 SDSLQ96GA7 329 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 MRGPRX1Q96LB2 322 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 SIGLEC12Q96PQ1 595 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 RASL10BQ96S79 203 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 TMEM204Q9BSN7 226 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 ALKBH7Q9BT30 221 aaPredicted RBP5.74□□□□□ -1.49
USP28-207ENST00000538475 MRPL13Q9BYD1 178 aaKnown RBP5.74□□□□□ -1.49
USP28-207ENST00000538475 ZBP1Q9H171 429 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 ZNF665Q9H7R5 613 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 ZNF703Q9H7S9 590 aaPredicted RBP5.74□□□□□ -1.49
USP28-207ENST00000538475 MBNL1Q9NR56 388 aaKnown RBP5.74□□□□□ -1.49
USP28-207ENST00000538475 GLRX2Q9NS18 164 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 SLC35D1Q9NTN3 355 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 SLC39A9Q9NUM3 307 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 ZNF586Q9NXT0 402 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 SERGEFQ9UGK8 458 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 MCTS1Q9ULC4 181 aaKnown RBP5.74□□□□□ -1.49
USP28-207ENST00000538475 LAMTOR2Q9Y2Q5 125 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 RNF115Q9Y4L5 304 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 COX11Q9Y6N1 276 aa5.74□□□□□ -1.49
USP28-207ENST00000538475 IGHV2OR16-5A0A0B4J2B6 119 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 A0A1B0GV50 99 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 PRSS38A1L453 326 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms