RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 FAM168AQ92567 244 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 TMEM54Q969K7 222 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 MS4A10Q96PG2 267 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 AMELYQ99218 206 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 WDR61Q9GZS3 305 aaKnown RBP4.63□□□□□ -1.67
LRP6-203ENST00000538239 WNT5BQ9H1J7 359 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 CYB5R1Q9UHQ9 305 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 SLC45A2Q9UMX9 530 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 ANKRD20A5PA0PJZ0 165 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 IFNL4K9M1U5 179 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 CTSDP07339 412 aaPredicted RBP4.63□□□□□ -1.67
LRP6-203ENST00000538239 CD37P11049 281 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 SCAND1P57086 179 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 C16orf82Q7Z2V1 217 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 PDPNQ86YL7 162 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 BAP18Q8IXM2 172 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 DTD1Q8TEA8 209 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 STARD4Q96DR4 205 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 IDI2-AS1Q9NZ38 188 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 KPTNQ9Y664 436 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 AUP1Q9Y679 476 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 LHFPL6Q9Y693 200 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 TGFBR3LH3BV60 316 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 SPINK4O60575 86 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 CD40P25942 277 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 CD200P41217 278 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 HOXA4Q00056 320 aaPredicted RBP4.63□□□□□ -1.67
LRP6-203ENST00000538239 FAM219AQ8IW50 185 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 C9orf106Q8NAJ2 232 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 ADAD2Q8NCV1 583 aaKnown RBP4.63□□□□□ -1.67
LRP6-203ENST00000538239 NUP37Q8NFH4 326 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 SNX22Q96L94 193 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 ST6GALNAC2Q9UJ37 374 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 NUP214P35658 2090 aaPredicted RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 LEUTXA8MZ59 168 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 PPP5D1E7EU14 171 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 ADAP1O75689 374 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 TPPP2P59282 170 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 ERVS71-1P61550 626 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 ZNF154Q13106 437 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 PDZD11Q5EBL8 140 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 SLC25A53Q5H9E4 307 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 RNFT1Q5M7Z0 435 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 UNQ5815/PRO19632Q6UWF5 114 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 OR10G4Q8NGN3 311 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 OR10G9Q8NGN4 311 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 OR10G7Q8NGN6 311 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 UFC1Q9Y3C8 167 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 IGHV3OR16-12A0A075B7B8 117 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 CHST1O43916 411 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 NQO2P16083 231 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 LIMS1P48059 325 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 CDC34P49427 236 aaPredicted RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 FGF12P61328 243 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 DHRS7BQ6IAN0 325 aaPredicted RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 PNKDQ8N490 385 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 OR1L8Q8NGR8 309 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 OR4X1Q8NH49 305 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 CTHRC1Q96CG8 243 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 TLNRD1Q9H1K6 362 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 GREB1Q4ZG55 1949 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 PIKFYVEQ9Y2I7 2098 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 J3QR06 171 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 RAMP1O60894 148 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 PRSS23O95084 383 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 HOXB1P14653 301 aaPredicted RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 RPS4Y1P22090 263 aaKnown RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 GNLYP22749 145 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 MPV17P39210 176 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 MMP16P51512 607 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 UBE2L3P68036 154 aaKnown RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 PAX5Q02548 391 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 ENDOGQ14249 297 aaKnown RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 SLC25A42Q86VD7 318 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 OR8I2Q8N0Y5 310 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 ABHD12Q8N2K0 398 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 GCSAMQ8N6F7 178 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 FAM222BQ8WU58 562 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 PGLYRP3Q96LB9 341 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 VSIG4Q9Y279 399 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 CKAP5Q14008 2032 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 NYNRINQ9P2P1 1898 aaKnown RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 PTPRFP10586 1907 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 G3V3Q6 166 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 GSTZ1O43708 216 aaPredicted RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 FOXH1O75593 365 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 ID1P41134 155 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 PJVKQ0ZLH3 352 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 ZXDCQ2QGD7 858 aaPredicted RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 IGSF11Q5DX21 431 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 TIMM23BQ5SRD1 257 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 OR2C3Q8N628 320 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 LILRB4Q8NHJ6 448 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 POM121Q96HA1 1249 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 WDYHV1Q96HA8 205 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 SLIRPQ9GZT3 109 aaKnown RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 PRDM14Q9GZV8 571 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 IGKV1D-42A0A075B6H8 117 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 CRHP06850 196 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 GNG4P50150 75 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms