RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 SGCDQ92629 289 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 TFAP2CQ92754 450 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 MRPS24Q96EL2 167 aaKnown RBP11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 CYYR1Q96J86 154 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 FKBP14Q9NWM8 211 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 RCC2Q9P258 522 aaKnown RBP11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 UBE2QL1A1L167 161 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 SLC31A2O15432 143 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 SPINT2O43291 252 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 CD1AP06126 327 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 CDK1P06493 297 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 IGLL1P15814 213 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 IL3RAP26951 378 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 LOXL3P58215 753 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 GABPB1Q06547 395 aaPredicted RBP11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 ZNF816Q0VGE8 651 aaPredicted RBP11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 GPR50Q13585 617 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 FAM27D1Q5T7N8 215 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 ZNF329Q86UD4 541 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 CDH26Q8IXH8 852 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 NKAIN3Q8N8D7 197 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 OR1L1Q8NH94 360 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 NOL4LQ96MY1 436 aaPredicted RBP11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 TMED9Q9BVK6 235 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 MND1Q9BWT6 205 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 GNG12Q9UBI6 72 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 NKX1-2Q9UD57 310 aaPredicted RBP11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 LINC00527Q9UJ94 153 aa11.33□□□□□ -0.6
RTN3P1-201ENST00000536295 NCBP2LA6PVI3 153 aaKnown RBP11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 SERPINE3A8MV23 424 aa11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 HBZP02008 142 aa11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 RCC1P18754 421 aaPredicted RBP11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 ACSM3Q53FZ2 586 aa11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 NKAPLQ5M9Q1 402 aa11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 C6orf183Q5T699 404 aa11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 LYPD6Q86Y78 171 aa11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 LINC00311Q8N616 119 aa11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 THRSPQ92748 146 aa11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 PHF21AQ96BD5 680 aa11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 RBMXL1Q96E39 390 aaKnown RBP11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 Q96M66 194 aa11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 UQCC2Q9BRT2 126 aa11.32□□□□□ -0.6
RTN3P1-201ENST00000536295 FAM90A10PA6NDY2 464 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 FAM90A7PA6NKC0 464 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 FAM90A23PA8MXZ1 464 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 FGF16O43320 207 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 MPIG6BO95866 241 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 FUT3P21217 361 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 GP2P55259 537 aaKnown RBP11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 MED22Q15528 200 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 RBM48Q5RL73 367 aaKnown RBP11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 C6orf141Q5SZD1 244 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 SIGIRRQ6IA17 410 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 C5orf24Q7Z6I8 188 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 SLC35E3Q7Z769 313 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 C8orf31Q8N9H6 132 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 RTN4IP1Q8WWV3 396 aaPredicted RBP11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 EAF1Q96JC9 268 aaPredicted RBP11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 CST11Q9H112 138 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 DCLRE1BQ9H816 532 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 RAB9BQ9NP90 201 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 NECAP2Q9NVZ3 263 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 SCN3BQ9NY72 215 aa11.31□□□□□ -0.6
RTN3P1-201ENST00000536295 ZNF736B4DX44 427 aaPredicted RBP11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 H0YHG0 523 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 PDCD6O75340 191 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 ZNF134P52741 427 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 AQP4P55087 323 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 EBI3Q14213 229 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 SPHARQ15513 63 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 CT45A1Q5HYN5 189 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 FOXB2Q5VYV0 432 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 OR10K2Q6IF99 312 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 UNQ9370/PRO34162Q6UXP9 181 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 Q6ZPA2 131 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 SLC25A48Q6ZT89 311 aaKnown RBP11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 REC114Q7Z4M0 266 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 TGIF2LXQ8IUE1 241 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 IZUMO1Q8IYV9 350 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 MS4A15Q8N5U1 240 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 ZNF439Q8NDP4 499 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 WFDC9Q8NEX5 89 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 OR2T10Q8NGZ9 312 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 CT45A3Q8NHU0 189 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 MRAPQ8TCY5 172 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 CHPT1Q8WUD6 406 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 ST6GALNAC6Q969X2 333 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 KCNK15Q9H427 330 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 TAF9BQ9HBM6 251 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 KCNIP1Q9NZI2 227 aa11.3□□□□□ -0.6
RTN3P1-201ENST00000536295 NOTCH3Q9UM47 2321 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 LINC01548A6NM66 108 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 CA11O75493 328 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 SC5DO75845 299 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 SLC35A2P78381 396 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 GNMTQ14749 295 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 Q3ZCU0 254 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 RNLSQ5VYX0 342 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 GLT8D1Q68CQ7 371 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 TRAT1Q6PIZ9 186 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms