RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 SEZ6L2Q6UXD5 910 aa9.79□□□□□ -0.84
AMBRA1-211ENST00000533727 ISOC2Q96AB3 205 aa9.79□□□□□ -0.84
AMBRA1-211ENST00000533727 NTNG2Q96CW9 530 aa9.79□□□□□ -0.84
AMBRA1-211ENST00000533727 SLC2A9Q9NRM0 540 aa9.79□□□□□ -0.84
AMBRA1-211ENST00000533727 PRDX2P32119 198 aa9.79□□□□□ -0.84
AMBRA1-211ENST00000533727 PET117Q6UWS5 81 aa9.79□□□□□ -0.84
AMBRA1-211ENST00000533727 OR2V2Q96R30 315 aa9.79□□□□□ -0.84
AMBRA1-211ENST00000533727 FAAP24Q9BTP7 215 aa9.79□□□□□ -0.84
AMBRA1-211ENST00000533727 ELF5Q9UKW6 265 aaPredicted RBP9.79□□□□□ -0.84
AMBRA1-211ENST00000533727 MYOFQ9NZM1 2061 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 IAPPP10997 89 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 CD200P41217 278 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 PPP1R1AQ13522 171 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 ABLIM2Q6H8Q1 611 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 PRSS54Q6PEW0 395 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 ADAMTS17Q8TE56 1095 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 OR2D2Q9H210 308 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 CENPVL1A0A0U1RR11 272 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 LOC102723971A0A1B0GUV8 181 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 C7orf77A4D0Y5 90 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 CLEC18AA5D8T8 446 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A10PA6NDY2 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A18PA6NE21 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A16PA6NEW6 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A20PA6NIJ5 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A8PA6NJQ4 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A7PA6NKC0 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A22PA8MWA6 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A12PA8MX19 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A5PA8MXJ8 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A23PA8MXZ1 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A15PP0C7V4 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A13PP0C7W8 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A14PP0C7W9 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM90A24PP0C7X0 464 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 HLA-DRB3P79483 266 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 ZNF154Q13106 437 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 ZNF273Q14593 569 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FADS6Q8N9I5 356 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 CLEC18CQ8NCF0 446 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 IL22RA2Q969J5 263 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 ZNF714Q96N38 554 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 SEMA5BQ9P283 1151 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 COX7A2P2O60397 106 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 IL18BPO95998 194 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 RPL13AP40429 203 aaKnown RBP9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 FAM219BQ5XKK7 198 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 NOL4LQ96MY1 436 aaPredicted RBP9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 COL25A1Q9BXS0 654 aaPredicted RBP9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 PECRQ9BY49 303 aa9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 MRPS18AQ9NVS2 196 aaKnown RBP9.78□□□□□ -0.84
AMBRA1-211ENST00000533727 RPLP1P05386 114 aaKnown RBP9.77□□□□□ -0.84
AMBRA1-211ENST00000533727 LPAR6P43657 344 aa9.77□□□□□ -0.84
AMBRA1-211ENST00000533727 LIMS1P48059 325 aa9.77□□□□□ -0.84
AMBRA1-211ENST00000533727 PNRC1Q12796 327 aaPredicted RBP9.77□□□□□ -0.84
AMBRA1-211ENST00000533727 SLC25A53Q5H9E4 307 aa9.77□□□□□ -0.84
AMBRA1-211ENST00000533727 NHLRC2Q8NBF2 726 aa9.77□□□□□ -0.84
AMBRA1-211ENST00000533727 ITLN1Q8WWA0 313 aa9.77□□□□□ -0.84
AMBRA1-211ENST00000533727 SNX22Q96L94 193 aa9.77□□□□□ -0.84
AMBRA1-211ENST00000533727 ZNF107Q9UII5 783 aaPredicted RBP9.77□□□□□ -0.84
AMBRA1-211ENST00000533727 PLA2G10O15496 165 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 OR7C2O60412 319 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 IFITM3Q01628 133 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 NHLH1Q02575 133 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 FUT5Q11128 374 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 RAB32Q13637 225 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 Q6ZN92 141 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 C6orf201Q7Z4U5 140 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 OR4A4PQ8NGN8 299 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 FAM222BQ8WU58 562 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 TMEM54Q969K7 222 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 SRXN1Q9BYN0 137 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 BCL3P20749 454 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 ERVFC1-1P60608 527 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 ROM1Q03395 351 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 FAHD2BQ6P2I3 314 aaPredicted RBP9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 OR5R1Q8NH85 324 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 FAHD2AQ96GK7 314 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 HSD17B10Q99714 261 aaKnown RBP9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 PCGF1Q9BSM1 259 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 RNF122Q9H9V4 155 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 ABCA7Q8IZY2 2146 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 TMEM229AB2RXF0 380 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 H3BP45 60 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 DUS4LO95620 317 aaKnown RBP9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 SLC25A6P12236 298 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 OR52L2PQ8NGH6 319 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 RAB40CQ96S21 281 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 FRRS1LQ9P0K9 344 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 NAT8BQ9UHF3 227 aa9.77□□□□□ -0.85
AMBRA1-211ENST00000533727 TDRD6O60522 2096 aaKnown RBP9.76□□□□□ -0.85
AMBRA1-211ENST00000533727 ZSWIM8A7E2V4 1837 aa9.76□□□□□ -0.85
AMBRA1-211ENST00000533727 ANKRD20A5PA0PJZ0 165 aa9.76□□□□□ -0.85
AMBRA1-211ENST00000533727 MS4A18H0YCH9 400 aa9.76□□□□□ -0.85
AMBRA1-211ENST00000533727 CTAG2O75638 210 aa9.76□□□□□ -0.85
AMBRA1-211ENST00000533727 ACAA1P09110 424 aaPredicted RBP9.76□□□□□ -0.85
AMBRA1-211ENST00000533727 NAAAQ02083 359 aa9.76□□□□□ -0.85
AMBRA1-211ENST00000533727 MS4A18Q3C1V0 323 aa9.76□□□□□ -0.85
AMBRA1-211ENST00000533727 PTX4Q96A99 478 aa9.76□□□□□ -0.85
AMBRA1-211ENST00000533727 TMEM147Q9BVK8 224 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms