RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 TAF9BQ9HBM6 251 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 PARP11Q9NR21 331 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 TAS2R3Q9NYW6 316 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 ZNF581Q9P0T4 197 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 CARHSP1Q9Y2V2 147 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 GTF3C1Q12789 2109 aa4.84□□□□□ -1.64
ATPAF1-210ENST00000532925 FRYLO94915 3013 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 A0A1B0GU03 582 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 SPAARA0A1B0GVQ0 90 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 RNF212BA8MTL3 300 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 TRIM77I1YAP6 450 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 SLC33A1O00400 549 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 SH2D1BO14796 132 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 PHF1O43189 567 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 PITX3O75364 302 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 SCAF4O95104 1147 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 CGAP01215 116 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 CRYABP02511 175 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 CA6P23280 308 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 F2RP25116 425 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 TIMP3P35625 211 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 NKX2-1P43699 371 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 IDH3GP51553 393 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 F2RL1P55085 397 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 PJVKQ0ZLH3 352 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF718Q3SXZ3 478 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 PHLDA2Q53GA4 152 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 KRTCAP3Q53RY4 240 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 IGSF11Q5DX21 431 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 BEX5Q5H9J7 111 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 FAM209AQ5JX71 171 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 TIMM23BQ5SRD1 257 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF324BQ6AW86 544 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 SLC35E4Q6ICL7 350 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 TBC1D26Q86UD7 250 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 VASH2Q86V25 355 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF695Q8IW36 515 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 FAM219AQ8IW50 185 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 SLC35G3Q8N808 338 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 WDR31Q8NA23 367 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 C9orf106Q8NAJ2 232 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 SCCPDHQ8NBX0 429 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 RELL2Q8NC24 303 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 BHLHE23Q8NDY6 225 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 LFNGQ8NES3 379 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 OR10V1Q8NGI7 309 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 OR1J1Q8NGS3 322 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 OR10J5Q8NHC4 309 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 SLC25A40Q8TBP6 338 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 KLF14Q8TD94 323 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 DYRK2Q92630 601 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 CYYR1Q96J86 154 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 TRIB1Q96RU8 372 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 TP53RKQ96S44 253 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 DMRTA2Q96SC8 542 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 GINS3Q9BRX5 216 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 OR2J1Q9GZK6 312 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 SLC25A31Q9H0C2 315 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 SMDT1Q9H4I9 107 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 NCOR1P1Q9H4R4 102 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 LIN7CQ9NUP9 197 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 COA4Q9NYJ1 87 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 GSKIPQ9P0R6 139 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 TAAR3PQ9P1P4 343 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF629Q9UEG4 869 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 FBXL17Q9UF56 701 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 PURGQ9UJV8 347 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 PROCRQ9UNN8 238 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 POLR3KQ9Y2Y1 108 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 STRAPQ9Y3F4 350 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 MMP24Q9Y5R2 645 aa4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 CHD3Q12873 2000 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-210ENST00000532925 IGKV1D-13A0A0B4J2D9 117 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 IGKV1-6A0A0C4DH72 117 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 A0A1B0GW64 132 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 TMEM30CPA0ZSE6 113 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 TMEM218A2RU14 115 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 ZSCAN5BA6NJL1 495 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 OR5H1A6NKK0 313 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 UMAD1C9J7I0 102 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 FAM90A26D6RGX4 464 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 TNFSF13O75888 250 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 LYZL6O75951 148 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 ATG12O94817 140 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 NXPH2O95156 264 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 LY86O95711 162 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 OR2H2O95918 312 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 HEXAP06865 529 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 SCTP09683 121 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 CECR9P0C854 216 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 IGKV1-13P0DP09 117 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 SPP1P10451 314 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF44P15621 663 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 WT1P19544 449 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 CAV2P51636 162 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 TMEM33P57088 247 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 TAS2R30P59541 319 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 RPS23P62266 143 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 PMP22Q01453 160 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 PSG7Q13046 419 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms