RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	GABARAPL3	Q9BY60	117 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	MRO	Q9BYG7	248 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	PRSS22	Q9GZN4	317 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	FAM234A	Q9H0X4	552 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	SIAE	Q9HAT2	523 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	PATZ1	Q9HBE1	687 aa	Known RBP	4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	ACOT13	Q9NPJ3	140 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	MIEF1	Q9NQG6	463 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	ELOVL5	Q9NYP7	299 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	FLRT3	Q9NZU0	649 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	UGT2A1	Q9Y4X1	527 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	SPIN1	Q9Y657	262 aa	Predicted RBP	4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	VPS13B	Q7Z7G8	4022 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	DPRX	A6NFQ7	191 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	RFPL4A	A6NLU0	287 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636		F5H768	121 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	RFPL4AL1	F8VTS6	287 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636		J3QLI3	93 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	SIGLEC5	O15389	551 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	SPINT2	O43291	252 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	XPNPEP2	O43895	674 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	ATP5L	O75964	103 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	NDUFB4	O95168	129 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	GADD45G	O95257	159 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	IFNA10	P01566	189 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	TACSTD2	P09758	323 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	H2BFM	P0C1H6	154 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	ZNF35	P13682	527 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	SELE	P16581	610 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	IMPA1	P29218	277 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	FMO3	P31513	532 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	SSTR5	P35346	364 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	IFNGR2	P38484	337 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	CEACAM6	P40199	344 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	MNDA	P41218	407 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	XCR1	P46094	333 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	BDKRB1	P46663	353 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	VEGFC	P49767	419 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	SSR4	P51571	173 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	CAV2	P51636	162 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	EFNA4	P52798	201 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	CLDN17	P56750	224 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	RPL19	P84098	196 aa	Known RBP	4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	OXA1L	Q15070	435 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	RAB35	Q15286	201 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	NSDHL	Q15738	373 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	TAF9	Q16594	264 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	HAGH	Q16775	308 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	ATP6V1F	Q16864	119 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	ZNF181	Q2M3W8	571 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	ZNF404	Q494X3	552 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	ACTL10	Q5JWF8	245 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	FAM219B	Q5XKK7	198 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	FAM71E1	Q6IPT2	247 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	CASP12	Q6UXS9	341 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	ZNF767P	Q75MW2	155 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	C5orf24	Q7Z6I8	188 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	C17orf64	Q86WR6	236 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	CLECL1	Q8IZS7	167 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	KLHDC1	Q8N7A1	406 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	SIGLECL1	Q8N7X8	197 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	OR10G2	Q8NGC3	310 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	OR11H4	Q8NGC9	324 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	OR51Q1	Q8NH59	317 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	OR2AE1	Q8NHA4	323 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	OR14A16	Q8NHC5	309 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	MCFD2	Q8NI22	146 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	LYPD6B	Q8NI32	183 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	CNIH3	Q8TBE1	160 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	NTN5	Q8WTR8	489 aa	Predicted RBP	4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	TAAR8	Q969N4	342 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	NEIL2	Q969S2	332 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	IL17F	Q96PD4	163 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	RNF2	Q99496	336 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	FAIM2	Q9BWQ8	316 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	DEFB126	Q9BYW3	111 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	CSTL1	Q9H114	145 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	SPNS1	Q9H2V7	528 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	RNF121	Q9H920	327 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	PELI2	Q9HAT8	420 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	RHOF	Q9HBH0	211 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	TEX10	Q9NXF1	929 aa	Predicted RBP	4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	B3GNT2	Q9NY97	397 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	KCNG2	Q9UJ96	466 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	MOK	Q9UQ07	419 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	ASF1A	Q9Y294	204 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	RPL36	Q9Y3U8	105 aa	Known RBP	4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636	ENPP4	Q9Y6X5	453 aa		4.2	□□□□□ -1.74
PABPC1-223	ENST00000523636		A0A0A6YYD5	115 aa		4.19	□□□□□ -1.74
PABPC1-223	ENST00000523636	IGKV1-8	A0A0C4DH67	115 aa		4.19	□□□□□ -1.74
PABPC1-223	ENST00000523636	CCDC182	A6NF36	153 aa		4.19	□□□□□ -1.74
PABPC1-223	ENST00000523636		E7EQL1	145 aa		4.19	□□□□□ -1.74
PABPC1-223	ENST00000523636	FAAH	O00519	579 aa		4.19	□□□□□ -1.74
PABPC1-223	ENST00000523636	MLNR	O43193	412 aa		4.19	□□□□□ -1.74
PABPC1-223	ENST00000523636	PRKY	O43930	277 aa		4.19	□□□□□ -1.74
PABPC1-223	ENST00000523636	EIF4E2	O60573	245 aa	Known RBP	4.19	□□□□□ -1.74
PABPC1-223	ENST00000523636	HPGDS	O60760	199 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms