RNA–Protein interactions for RNA: ENST00000508579.5

CAST-222, Transcript of calpastatin, human

TSL 2 BASIC

Gene CAST, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-222	ENST00000508579		Q6ZT83	130 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579		Q6ZVH6	145 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579	CEACAM19	Q7Z692	300 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579	PGBD5	Q8N414	524 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579	RBMXL3	Q8N7X1	1067 aa	Known RBP	7.18	□□□□□ -1.26
CAST-222	ENST00000508579	OR2K2	Q8NGT1	345 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579	OR51E1	Q8TCB6	317 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579	TWIST2	Q8WVJ9	160 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579	CRYGN	Q8WXF5	182 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579	MBD6	Q96DN6	1003 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579	RTP4	Q96DX8	246 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579	DYNLL2	Q96FJ2	89 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579	OR4C12	Q96R67	309 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579	MBNL3	Q9NUK0	354 aa	Known RBP	7.18	□□□□□ -1.26
CAST-222	ENST00000508579	AK3	Q9UIJ7	227 aa		7.18	□□□□□ -1.26
CAST-222	ENST00000508579	TEX48	A0A1B0GUV7	120 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	DUXB	A0A1W2PPF3	345 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	ZNF860	A6NHJ4	632 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	FAM90A27P	A6NNH2	459 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579		H0YJW9	148 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	SYNGR1	O43759	233 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	UBL3	O95164	117 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	OR2H2	O95918	312 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	LINC00032	P0C843	101 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	ACP5	P13686	325 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	BLVRB	P30043	206 aa	Predicted RBP	7.17	□□□□□ -1.26
CAST-222	ENST00000508579	CDKN2A	P42771	156 aa	Known RBP	7.17	□□□□□ -1.26
CAST-222	ENST00000508579	AVPR1B	P47901	424 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	C1QTNF8	P60827	252 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	YPEL3	P61236	119 aa	Predicted RBP	7.17	□□□□□ -1.26
CAST-222	ENST00000508579	SEC11A	P67812	179 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	IL10RB	Q08334	325 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	PNRC1	Q12796	327 aa	Predicted RBP	7.17	□□□□□ -1.26
CAST-222	ENST00000508579	KLF9	Q13886	244 aa	Predicted RBP	7.17	□□□□□ -1.26
CAST-222	ENST00000508579	CCL15	Q16663	113 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	LINC01620	Q4KN68	170 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	FNDC7	Q5VTL7	733 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	DHRS13	Q6UX07	377 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	LRP11	Q86VZ4	500 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	VN1R2	Q8NFZ6	395 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	OR2M3	Q8NG83	312 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	OR10G7	Q8NGN6	311 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	OR4C13	Q8NGP0	309 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	CLEC4D	Q8WXI8	215 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	ZNF488	Q96MN9	340 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	RASL10B	Q96S79	203 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	SDF2	Q99470	211 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	SPIN2A	Q99865	258 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	SPIN2B	Q9BPZ2	258 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	MLST8	Q9BVC4	326 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	SPANXD	Q9BXN6	97 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	OR2H1	Q9GZK4	316 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	WDR13	Q9H1Z4	485 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	ZNF703	Q9H7S9	590 aa	Predicted RBP	7.17	□□□□□ -1.26
CAST-222	ENST00000508579	KLHL13	Q9P2N7	655 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	PRND	Q9UKY0	176 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	POLDIP2	Q9Y2S7	368 aa		7.17	□□□□□ -1.26
CAST-222	ENST00000508579	hCG_1818297	A0A087WSY0	165 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	TRAV14DV4	A0A0A6YYC5	116 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	TLCD2	A6NGC4	264 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	FNDC10	F2Z333	226 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	GABARAP	H6UMI1	98 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	RER1	O15258	196 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	TBL1X	O60907	577 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	LSM8	O95777	96 aa	Known RBP	7.16	□□□□□ -1.26
CAST-222	ENST00000508579	PPIB	P23284	216 aa	Known RBP	7.16	□□□□□ -1.26
CAST-222	ENST00000508579	ZNF93	P35789	620 aa	Predicted RBP	7.16	□□□□□ -1.26
CAST-222	ENST00000508579	OR1E2	P47887	323 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	GNG5	P63218	68 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	KLRB1	Q12918	225 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	CATR1	Q13166	79 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	PLK5	Q496M5	336 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	IQCF1	Q8N6M8	205 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	PTGR2	Q8N8N7	351 aa	Predicted RBP	7.16	□□□□□ -1.26
CAST-222	ENST00000508579	B3GALNT2	Q8NCR0	500 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	TMEM125	Q96AQ2	219 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	STARD4	Q96DR4	205 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	TVP23C	Q96ET8	276 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	FEV	Q99581	238 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	PYGO2	Q9BRQ0	406 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	GABARAPL3	Q9BY60	117 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	ST20	Q9HBF5	79 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	RPRM	Q9NS64	109 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	RLIM	Q9NVW2	624 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	PEMT	Q9UBM1	199 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	TP53TG1	Q9Y2A0	90 aa		7.16	□□□□□ -1.26
CAST-222	ENST00000508579	EVPL	Q92817	2033 aa		7.15	□□□□□ -1.26
CAST-222	ENST00000508579	TMEM212	A6NML5	194 aa		7.15	□□□□□ -1.26
CAST-222	ENST00000508579		C9JQL5	133 aa		7.15	□□□□□ -1.26
CAST-222	ENST00000508579	TAAR5	O14804	337 aa		7.15	□□□□□ -1.26
CAST-222	ENST00000508579	NPIPB7	O75200	414 aa		7.15	□□□□□ -1.26
CAST-222	ENST00000508579	HRAS	P01112	189 aa		7.15	□□□□□ -1.26
CAST-222	ENST00000508579	KRAS	P01116	189 aa		7.15	□□□□□ -1.26
CAST-222	ENST00000508579	PPIF	P30405	207 aa	Known RBP	7.15	□□□□□ -1.26
CAST-222	ENST00000508579	NKX2-1	P43699	371 aa	Predicted RBP	7.15	□□□□□ -1.26
CAST-222	ENST00000508579	H2BFS	P57053	126 aa		7.15	□□□□□ -1.26
CAST-222	ENST00000508579	DGCR2	P98153	550 aa		7.15	□□□□□ -1.26
CAST-222	ENST00000508579	TUSC3	Q13454	348 aa		7.15	□□□□□ -1.26
CAST-222	ENST00000508579	SPHAR	Q15513	63 aa		7.15	□□□□□ -1.26
CAST-222	ENST00000508579	PMCHL1	Q16048	86 aa		7.15	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms