RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 ERICH4A6NGS2 130 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 C12orf77C9JDV5 145 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 MCRIP1C9JLW8 97 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 CCRL2O00421 344 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 ORC5O43913 435 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 CRTAPO75718 401 aaPredicted RBP11.32□□□□□ -0.6
RAB28-205ENST00000508274 CDK1P06493 297 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 ZNF816Q0VGE8 651 aaPredicted RBP11.32□□□□□ -0.6
RAB28-205ENST00000508274 KHDC1LQ5JSQ8 128 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 C5orf24Q7Z6I8 188 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 MOB3BQ86TA1 216 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 ZNF329Q86UD4 541 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 PRR18Q8N4B5 295 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 OR4X2Q8NGF9 303 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 OR52M1Q8NGK5 317 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 FAM46BQ96A09 425 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 MRPS24Q96EL2 167 aaKnown RBP11.32□□□□□ -0.6
RAB28-205ENST00000508274 Q96M66 194 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 NOL4LQ96MY1 436 aaPredicted RBP11.32□□□□□ -0.6
RAB28-205ENST00000508274 SPACA1Q9HBV2 294 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 ETAA1Q9NY74 926 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 TRAPPC2LQ9UL33 140 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 ERGIC3Q9Y282 383 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 PEX16Q9Y5Y5 336 aa11.32□□□□□ -0.6
RAB28-205ENST00000508274 PTGES3LE9PB15 166 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 PF4V1P10720 104 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 RCC1P18754 421 aaPredicted RBP11.31□□□□□ -0.6
RAB28-205ENST00000508274 AQP4P55087 323 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 CDH26Q8IXH8 852 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 NKAIN3Q8N8D7 197 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 OR10V1Q8NGI7 309 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 OR1L1Q8NH94 360 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 NRG4Q8WWG1 115 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 ST6GALNAC6Q969X2 333 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 PHF21AQ96BD5 680 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 TMED9Q9BVK6 235 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 MND1Q9BWT6 205 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 VCXQ9H320 206 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 LINC00527Q9UJ94 153 aa11.31□□□□□ -0.6
RAB28-205ENST00000508274 LSM2Q9Y333 95 aaKnown RBP11.31□□□□□ -0.6
RAB28-205ENST00000508274 TSSC4Q9Y5U2 329 aaPredicted RBP11.31□□□□□ -0.6
RAB28-205ENST00000508274 UBE2QL1A1L167 161 aa11.3□□□□□ -0.6
RAB28-205ENST00000508274 PSMB11A5LHX3 300 aa11.3□□□□□ -0.6
RAB28-205ENST00000508274 GAPDHP04406 335 aaKnown RBP11.3□□□□□ -0.6
RAB28-205ENST00000508274 CD33P20138 364 aa11.3□□□□□ -0.6
RAB28-205ENST00000508274 MAPK3P27361 379 aaPredicted RBP11.3□□□□□ -0.6
RAB28-205ENST00000508274 GPR50Q13585 617 aa11.3□□□□□ -0.6
RAB28-205ENST00000508274 ACSM3Q53FZ2 586 aa11.3□□□□□ -0.6
RAB28-205ENST00000508274 C6orf141Q5SZD1 244 aa11.3□□□□□ -0.6
RAB28-205ENST00000508274 GAPTQ8N292 157 aa11.3□□□□□ -0.6
RAB28-205ENST00000508274 LINC00311Q8N616 119 aa11.3□□□□□ -0.6
RAB28-205ENST00000508274 ZNF439Q8NDP4 499 aa11.3□□□□□ -0.6
RAB28-205ENST00000508274 RTN4IP1Q8WWV3 396 aaPredicted RBP11.3□□□□□ -0.6
RAB28-205ENST00000508274 KCNK15Q9H427 330 aa11.3□□□□□ -0.6
RAB28-205ENST00000508274 DCLRE1BQ9H816 532 aa11.3□□□□□ -0.6
RAB28-205ENST00000508274 FAM90A10PA6NDY2 464 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 FAM90A7PA6NKC0 464 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 FAM90A23PA8MXZ1 464 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 ZNF736B4DX44 427 aaPredicted RBP11.29□□□□□ -0.6
RAB28-205ENST00000508274 FGF16O43320 207 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 SC5DO75845 299 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 HBZP02008 142 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 IGLL1P15814 213 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 ZNF134P52741 427 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 EBI3Q14213 229 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 OR10K2Q6IF99 312 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 UNQ9370/PRO34162Q6UXP9 181 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 Q6ZPA2 131 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 LRRTM1Q86UE6 522 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 EAF1Q96JC9 268 aaPredicted RBP11.29□□□□□ -0.6
RAB28-205ENST00000508274 UQCC2Q9BRT2 126 aa11.29□□□□□ -0.6
RAB28-205ENST00000508274 LINC01548A6NM66 108 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 SPINT2O43291 252 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 MPIG6BO95866 241 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 PF4P02776 101 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 FUT3P21217 361 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 GNMTQ14749 295 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 SPHARQ15513 63 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 MED22Q15528 200 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 CT45A1Q5HYN5 189 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 RBM48Q5RL73 367 aaKnown RBP11.28□□□□□ -0.6
RAB28-205ENST00000508274 C6orf183Q5T699 404 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 FOXB2Q5VYV0 432 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 RNLSQ5VYX0 342 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 SLC25A48Q6ZT89 311 aaKnown RBP11.28□□□□□ -0.6
RAB28-205ENST00000508274 IZUMO1Q8IYV9 350 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 Q8N6K4 173 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 C8orf31Q8N9H6 132 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 CT45A3Q8NHU0 189 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 THRSPQ92748 146 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 GNG12Q9UBI6 72 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 NCBP2LA6PVI3 153 aaKnown RBP11.28□□□□□ -0.6
RAB28-205ENST00000508274 SERPINE3A8MV23 424 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 PDCD6O75340 191 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 VSIG8P0DPA2 414 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 SLC35A2P78381 396 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 NKAPLQ5M9Q1 402 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 C18orf65Q6ZTR6 163 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 MS4A15Q8N5U1 240 aa11.28□□□□□ -0.6
RAB28-205ENST00000508274 Q8N9W7 124 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms