RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 DKKL1Q9UK85 242 aa2.26□□□□□ -2.05
CLK1-214ENST00000496205 TET2Q6N021 2002 aaPredicted RBP2.25□□□□□ -2.05
CLK1-214ENST00000496205 IGLV4-69A0A075B6H9 119 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 IGHV3-72A0A0B4J1Y9 119 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 C5orf49A4QMS7 147 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 GMNCA6NCL1 334 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 SMIM9A6NGZ8 99 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 ARGFXA6NJG6 315 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 OR5H1A6NKK0 313 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 F5H5P2 479 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 NOS1APO75052 506 aaPredicted RBP2.25□□□□□ -2.05
CLK1-214ENST00000496205 GCM2O75603 506 aaPredicted RBP2.25□□□□□ -2.05
CLK1-214ENST00000496205 IGLV2-8P01709 118 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 FABP1P07148 127 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 RPSAP08865 295 aaKnown RBP2.25□□□□□ -2.05
CLK1-214ENST00000496205 OR4A8P0C604 315 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 M6PRP20645 277 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 GADD45AP24522 165 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 IMPA1P29218 277 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 ADORA1P30542 326 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 INPP1P49441 399 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 SPCS3P61009 180 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 HIST1H3AP68431 136 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 H3F3AP84243 136 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 SYCNQ0VAF6 134 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 KRR1Q13601 381 aaKnown RBP2.25□□□□□ -2.05
CLK1-214ENST00000496205 ELOCQ15369 112 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 PYCR3Q53H96 274 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 CENPWQ5EE01 88 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 HENMT1Q5T8I9 393 aaKnown RBP2.25□□□□□ -2.05
CLK1-214ENST00000496205 NXNL2Q5VZ03 156 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 TMEM215Q68D42 235 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 TMEM42Q69YG0 159 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 IGFL3Q6UXB1 125 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 TIFABQ6ZNK6 161 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 SHISA6Q6ZSJ9 500 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 CLEC20AQ6ZU45 233 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 HIST2H3AQ71DI3 136 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 SLC36A1Q7Z2H8 476 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 VN1R4Q7Z5H5 301 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 ORMDL3Q8N138 153 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 C1orf158Q8N1D5 194 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 ZNF555Q8NEP9 628 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 OR2D3Q8NGH3 330 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 FAM172AQ8WUF8 416 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 TNFAIP8L1Q8WVP5 186 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 DGCR14Q96DF8 476 aaKnown RBP2.25□□□□□ -2.05
CLK1-214ENST00000496205 PPP1R36Q96LQ0 422 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 OR7D2Q96RA2 312 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 ZNF382Q96SR6 550 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 NIPSNAP1Q9BPW8 284 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 OR51I1Q9H343 314 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 ZSCAN16Q9H4T2 348 aaPredicted RBP2.25□□□□□ -2.05
CLK1-214ENST00000496205 TAC3Q9UHF0 121 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 ZNF391Q9UJN7 358 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 KLK12Q9UKR0 248 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 POMPQ9Y244 141 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 YTHDF2Q9Y5A9 579 aaKnown RBP2.25□□□□□ -2.05
CLK1-214ENST00000496205 ZFYVE9O95405 1425 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 TNS2Q63HR2 1409 aa2.25□□□□□ -2.05
CLK1-214ENST00000496205 IGSF9BQ9UPX0 1349 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 GPATCH8Q9UKJ3 1502 aaKnown RBP2.24□□□□□ -2.05
CLK1-214ENST00000496205 A8MWL6 223 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 DISC1C4P0D8 188 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 LGALS9O00182 355 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 CIAO1O76071 339 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 APCSP02743 223 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 SOD3P08294 240 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 CST2P09228 141 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 CD79AP11912 226 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 CTSEP14091 401 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 RPS24P62847 133 aaKnown RBP2.24□□□□□ -2.05
CLK1-214ENST00000496205 RPL19P84098 196 aaKnown RBP2.24□□□□□ -2.05
CLK1-214ENST00000496205 ATP5G2Q06055 141 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 EBI3Q14213 229 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 SMUG1Q53HV7 270 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 FAM222AQ5U5X8 452 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 FAM78BQ5VT40 261 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 HACD4Q5VWC8 232 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 OR10K2Q6IF99 312 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 MORN3Q6PF18 240 aaPredicted RBP2.24□□□□□ -2.05
CLK1-214ENST00000496205 ZNF773Q6PK81 442 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 DHRS4L2Q6PKH6 230 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 NAA40Q86UY6 237 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 OR11L1Q8NGX0 322 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 OR5W2Q8NH69 310 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 Q8WTZ3 238 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 C18orf15Q96N68 181 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 RTBDNQ9BSG5 229 aaPredicted RBP2.24□□□□□ -2.05
CLK1-214ENST00000496205 TRIM4Q9C037 500 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 FGF23Q9GZV9 251 aaPredicted RBP2.24□□□□□ -2.05
CLK1-214ENST00000496205 NMNAT1Q9HAN9 279 aaPredicted RBP2.24□□□□□ -2.05
CLK1-214ENST00000496205 RBM12B-AS1Q9P1G2 102 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 TMEM14AQ9Y6G1 99 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 ZNFX1Q9P2E3 1918 aaKnown RBP2.24□□□□□ -2.05
CLK1-214ENST00000496205 NPATQ14207 1427 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 CAMSAP1Q5T5Y3 1602 aa2.24□□□□□ -2.05
CLK1-214ENST00000496205 ANKRD30AQ9BXX3 1397 aa2.23□□□□□ -2.05
CLK1-214ENST00000496205 PQLC2LA1A4F0 135 aa2.23□□□□□ -2.05
CLK1-214ENST00000496205 C2orf74A8MZ97 194 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms