RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PITPNC1Q9UKF7 332 aa4.07□□□□□ -1.76
PTCD3-219ENST00000494323 BAIAP2Q9UQB8 552 aa4.07□□□□□ -1.76
PTCD3-219ENST00000494323 SLC22A13Q9Y226 551 aa4.07□□□□□ -1.76
PTCD3-219ENST00000494323 WDR83OSQ9Y284 106 aa4.07□□□□□ -1.76
PTCD3-219ENST00000494323 TBL2Q9Y4P3 447 aaKnown RBP4.07□□□□□ -1.76
PTCD3-219ENST00000494323 LRP12Q9Y561 859 aa4.07□□□□□ -1.76
PTCD3-219ENST00000494323 TSSC4Q9Y5U2 329 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-219ENST00000494323 DNAH3Q8TD57 4116 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 SORL1Q92673 2214 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 RYR3Q15413 4870 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 FAM230AA0A1W2PPH8 454 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 FAM172BPA6NC97 362 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 ODF3BA8MYP8 253 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 PRR23D1E9PI22 279 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-219ENST00000494323 E9PI62 339 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 H3BSH0 61 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 NOS1APO75052 506 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-219ENST00000494323 MRPL3P09001 348 aaKnown RBP4.06□□□□□ -1.76
PTCD3-219ENST00000494323 PGA5P0DJD9 388 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 PRR23D2P0DMB1 279 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-219ENST00000494323 CALCBP10092 127 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 HSD17B1P14061 328 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 ALOX5APP20292 161 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 DYNLT3P51808 116 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 MTCP1P56278 107 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 EGFEM1PQ0D2K5 195 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 GAGE5Q13069 117 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 GAGE6Q13070 117 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 EDDM3AQ14507 147 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF684Q5T5D7 378 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 BAIAP2L2Q6UXY1 529 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 GDPD3Q7L5L3 318 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 TRPM8Q7Z2W7 1104 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF329Q86UD4 541 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF573Q86YE8 665 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 EGFL6Q8IUX8 553 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF676Q8N7Q3 588 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 THAP8Q8NA92 274 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 POC1AQ8NBT0 407 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 TRMT10AQ8TBZ6 339 aaKnown RBP4.06□□□□□ -1.76
PTCD3-219ENST00000494323 TEX47Q8TBZ9 253 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 SGK494Q96LW2 274 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 ASCL2Q99929 193 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 B9D2Q9BPU9 175 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 NRIP2Q9BQI9 281 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 DGCR6LQ9BY27 220 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 MROQ9BYG7 248 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 FAM206AQ9NX38 181 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 MTCH1Q9NZJ7 389 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 ENPP5Q9UJA9 477 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 LAMP5Q9UJQ1 280 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 TMED3Q9Y3Q3 217 aa4.06□□□□□ -1.76
PTCD3-219ENST00000494323 SAMHD1Q9Y3Z3 626 aaKnown RBP4.06□□□□□ -1.76
PTCD3-219ENST00000494323 IGHV2-26A0A0B4J1V2 119 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 A0A0U1RQV5 110 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 A0A1B0GUV1 79 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 PQLC2LA1A4F0 135 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 OR5B21A6NL26 309 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 PRAC2D3DTV9 90 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 E9PQ18 207 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 J3QT63 122 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF737O75373 536 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 DUS4LO95620 317 aaKnown RBP4.05□□□□□ -1.76
PTCD3-219ENST00000494323 CLIC3O95833 236 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 RLN1P04808 185 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 ALDOBP05062 364 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 SPP1P10451 314 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 PRKACGP22612 351 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 HTR1DP28221 377 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 PRDX6P30041 224 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 BRS3P32247 399 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 ERVK11-1P61568 191 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 MFGE8Q08431 387 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-219ENST00000494323 ODF4Q2M2E3 257 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 PHLDA2Q53GA4 152 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 HSP90B2PQ58FF3 399 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 CLVS2Q5SYC1 327 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 UTF1Q5T230 341 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 TMEM236Q5W0B7 351 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 OR2T5Q6IEZ7 315 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 PLEKHG7Q6ZR37 379 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 TCF23Q7RTU1 214 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 NRARPQ7Z6K4 114 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 TMEM179BQ7Z7N9 219 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 MMD2Q8IY49 270 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 DEFB107AQ8IZN7 70 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 PGAM4Q8N0Y7 254 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 ABHD12Q8N2K0 398 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 OR10G2Q8NGC3 310 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 OR11H4Q8NGC9 324 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 OR2T29Q8NH02 315 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 GIPC3Q8TF64 312 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF714Q96N38 554 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 DUX3Q96PT4 197 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 APOL4Q9BPW4 351 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF649Q9BS31 505 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 CHST6Q9GZX3 395 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 FAM107BQ9H098 131 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 TMEM133Q9H2Q1 129 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 REEP1Q9H902 201 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms