RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 KIR2DS3K7RE56 304 aa10.04□□□□□ -0.8
HDAC4-210ENST00000493582 TNFP01375 233 aa10.04□□□□□ -0.8
HDAC4-210ENST00000493582 TYMSP04818 313 aa10.04□□□□□ -0.8
HDAC4-210ENST00000493582 KIR2DS5Q14953 304 aa10.04□□□□□ -0.8
HDAC4-210ENST00000493582 CPEB3Q8NE35 698 aaKnown RBP10.04□□□□□ -0.8
HDAC4-210ENST00000493582 PATZ1Q9HBE1 687 aaKnown RBP10.04□□□□□ -0.8
HDAC4-210ENST00000493582 A0A0U1RQV5 110 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 CLEC18AA5D8T8 446 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 CCL25O15444 150 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 CLEC18CQ8NCF0 446 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 CMTM2Q8TAZ6 248 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 C22orf15Q8WYQ4 148 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 ST8SIA1Q92185 356 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 EXTL1Q92935 676 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 ANAPC16Q96DE5 110 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 ABHD14BQ96IU4 210 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 VAMP8Q9BV40 100 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 RBM24Q9BX46 236 aaKnown RBP10.03□□□□□ -0.8
HDAC4-210ENST00000493582 PTRH2Q9Y3E5 179 aaKnown RBP10.03□□□□□ -0.8
HDAC4-210ENST00000493582 SPTBN5Q9NRC6 3674 aaKnown RBP10.03□□□□□ -0.8
HDAC4-210ENST00000493582 IGHV5-51A0A0C4DH38 117 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 C20orf202A1L168 122 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 ANKUB1A6NFN9 424 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 C1QTNF9BB2RNN3 333 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 H3BMH7 237 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 OR7C1O76099 320 aaPredicted RBP10.03□□□□□ -0.8
HDAC4-210ENST00000493582 EGR1P18146 543 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 TCN2P20062 427 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 GFERP55789 205 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 TEX43Q6ZNM6 134 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 Q6ZRM9 215 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 Q6ZVH6 145 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
HDAC4-210ENST00000493582 OSR2Q8N2R0 312 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 ZNF525Q8N782 197 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 STPG4Q8N801 248 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 OR1N1Q8NGS0 311 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 FAM131CQ96AQ9 280 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 CIB3Q96Q77 187 aaPredicted RBP10.03□□□□□ -0.8
HDAC4-210ENST00000493582 HSPB9Q9BQS6 159 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 SLC25A22Q9H936 323 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 MSL2Q9HCI7 577 aa10.03□□□□□ -0.8
HDAC4-210ENST00000493582 A0A1W2PQF6 199 aa10.02□□□□□ -0.8
HDAC4-210ENST00000493582 AQP7O14520 342 aa10.02□□□□□ -0.8
HDAC4-210ENST00000493582 SCTP09683 121 aa10.02□□□□□ -0.8
HDAC4-210ENST00000493582 SSPNQ14714 243 aa10.02□□□□□ -0.8
HDAC4-210ENST00000493582 TMEM183BQ1AE95 376 aa10.02□□□□□ -0.8
HDAC4-210ENST00000493582 KCNIP4Q6PIL6 250 aa10.02□□□□□ -0.8
HDAC4-210ENST00000493582 GPR146Q96CH1 333 aa10.02□□□□□ -0.8
HDAC4-210ENST00000493582 SLC35E1Q96K37 410 aa10.02□□□□□ -0.8
HDAC4-210ENST00000493582 IMMP2LQ96T52 175 aa10.02□□□□□ -0.8
HDAC4-210ENST00000493582 PXMP4Q9Y6I8 212 aa10.02□□□□□ -0.8
HDAC4-210ENST00000493582 UNC13CQ8NB66 2214 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 TCRBV21S2A2A0A5A6 115 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 M0R135 149 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 UCP1P25874 307 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 SRP14P37108 136 aaKnown RBP10.02□□□□□ -0.81
HDAC4-210ENST00000493582 PSMB3P49720 205 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 PTTG1IPP53801 180 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 MALLQ13021 153 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.02□□□□□ -0.81
HDAC4-210ENST00000493582 HAPLN4Q86UW8 402 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 WDR5BQ86VZ2 330 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 OR1K1Q8NGR3 316 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 ZNF799Q96GE5 643 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 GABRG3Q99928 467 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 LNP1A1A4G5 178 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 HOXB2P14652 356 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 CTSSP25774 331 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 NTSR1P30989 418 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 CEACAM8P31997 349 aaPredicted RBP10.02□□□□□ -0.81
HDAC4-210ENST00000493582 ADMP35318 185 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 C17orf67Q0P5P2 114 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 RTL10Q7L3V2 364 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 BORCS8Q96FH0 119 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 WDYHV1Q96HA8 205 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 OR4C12Q96R67 309 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 TMEM9BQ9NQ34 198 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 RNF150Q9ULK6 438 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 TP53TG3Q9ULZ0 132 aa10.02□□□□□ -0.81
HDAC4-210ENST00000493582 ZNF407Q9C0G0 2248 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 C2orf16Q68DN1 1984 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 SLC22A20A6NK97 555 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 KIAA1324LA8MWY0 1029 aaPredicted RBP10.01□□□□□ -0.81
HDAC4-210ENST00000493582 PDCD6O75340 191 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 NDUFB8O95169 186 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 BMP5P22003 454 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 GUCA1AP43080 201 aaPredicted RBP10.01□□□□□ -0.81
HDAC4-210ENST00000493582 SERF2P84101 59 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 EIF3IQ13347 325 aaKnown RBP10.01□□□□□ -0.81
HDAC4-210ENST00000493582 LRRC75BQ2VPJ9 315 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 YAF2Q8IY57 180 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 OR51H1Q8NH63 302 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 PSMG3Q9BT73 122 aaPredicted RBP10.01□□□□□ -0.81
HDAC4-210ENST00000493582 OR51B6Q9H340 312 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 PLEK2Q9NYT0 353 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 RALGAPA1Q6GYQ0 2036 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 DUXBA0A1W2PPF3 345 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 PGPEP1LA6NFU8 196 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 TMEM250H0YL14 139 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms