RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TUSC2O75896 110 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 HLA-AP01891 365 aaKnown RBP8.32□□□□□ -1.08
USP11-211ENST00000489111 CTSDP07339 412 aaPredicted RBP8.32□□□□□ -1.08
USP11-211ENST00000489111 OR4E1P0C645 316 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 TRAPPC2P0DI81 140 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 TRAPPC2BP0DI82 140 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 VSIG10L2P0DP72 767 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 AKR1C4P17516 323 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 PI3P19957 117 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 VAMP1P23763 118 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 S100GP29377 79 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 GPR6P46095 362 aaPredicted RBP8.32□□□□□ -1.08
USP11-211ENST00000489111 TMEM33P57088 247 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 UBE2MP61081 183 aaKnown RBP8.32□□□□□ -1.08
USP11-211ENST00000489111 RRAS2P62070 204 aaPredicted RBP8.32□□□□□ -1.08
USP11-211ENST00000489111 RPL31P62899 125 aaKnown RBP8.32□□□□□ -1.08
USP11-211ENST00000489111 MEF2CQ06413 473 aaPredicted RBP8.32□□□□□ -1.08
USP11-211ENST00000489111 TMEM155Q4W5P6 130 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 LPCAT3Q6P1A2 487 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 FAHD2BQ6P2I3 314 aaPredicted RBP8.32□□□□□ -1.08
USP11-211ENST00000489111 LYPD2Q6UXB3 125 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 C5orf24Q7Z6I8 188 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 SLC25A42Q86VD7 318 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 H1FOOQ8IZA3 346 aaPredicted RBP8.32□□□□□ -1.08
USP11-211ENST00000489111 OR8B3Q8NGG8 313 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 SECTM1Q8WVN6 248 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 FAHD2AQ96GK7 314 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 OR8B2Q96RD0 313 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 DCTN5Q9BTE1 182 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 GHITMQ9H3K2 345 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 CALYQ9NYX4 217 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 GNG12Q9UBI6 72 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 MIOXQ9UGB7 285 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 GPR132Q9UNW8 380 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 RBM7Q9Y580 266 aaKnown RBP8.32□□□□□ -1.08
USP11-211ENST00000489111 LINC00312Q9Y6C7 94 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 SPTBN1Q01082 2364 aaKnown RBP8.31□□□□□ -1.08
USP11-211ENST00000489111 TRBV23-1A0A0A0MS06 115 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 HMX3A6NHT5 357 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 TNFRSF13BO14836 293 aaPredicted RBP8.31□□□□□ -1.08
USP11-211ENST00000489111 NDUFS7O75251 213 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 CEACAM6P40199 344 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 LUMP51884 338 aaPredicted RBP8.31□□□□□ -1.08
USP11-211ENST00000489111 UCP3P55916 312 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 PPP1R1AQ13522 171 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 TMEM30BQ3MIR4 351 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 ZNF626Q68DY1 528 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 LYG2Q86SG7 212 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 FAM185AQ8N0U4 392 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 CCDC71LQ8N9Z2 235 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 ADAD2Q8NCV1 583 aaKnown RBP8.31□□□□□ -1.08
USP11-211ENST00000489111 RFESDQ8TAC1 157 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 ZNF431Q8TF32 576 aaPredicted RBP8.31□□□□□ -1.08
USP11-211ENST00000489111 CAPSLQ8WWF8 208 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 NEIL1Q96FI4 390 aaPredicted RBP8.31□□□□□ -1.08
USP11-211ENST00000489111 ZNF486Q96H40 463 aaPredicted RBP8.31□□□□□ -1.08
USP11-211ENST00000489111 SLC5A7Q9GZV3 580 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 GAL3ST2Q9H3Q3 398 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 LIME1Q9H400 295 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 C5orf66Q9H5L9 145 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 BARX1Q9HBU1 254 aaPredicted RBP8.31□□□□□ -1.08
USP11-211ENST00000489111 OR2S2Q9NQN1 319 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 RDH8Q9NYR8 311 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 CTSZQ9UBR2 303 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 KCNS2Q9ULS6 477 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 UBE2J1Q9Y385 318 aaPredicted RBP8.31□□□□□ -1.08
USP11-211ENST00000489111 OR2W1Q9Y3N9 320 aa8.31□□□□□ -1.08
USP11-211ENST00000489111 ROS1P08922 2347 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 LRRK2Q5S007 2527 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 PKDREJQ9NTG1 2253 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 TEX13DA0A0J9YY54 714 aaPredicted RBP8.3□□□□□ -1.08
USP11-211ENST00000489111 KBTBD11-OT1A0A1B0GTJ5 212 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 ZNF729A6NN14 1252 aaPredicted RBP8.3□□□□□ -1.08
USP11-211ENST00000489111 C15orf65H3BRN8 121 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 CCNKO75909 580 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 RGS11O94810 467 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 IGHV4-39P01824 125 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 SSTR2P30874 369 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 PPP1CCP36873 323 aaKnown RBP8.3□□□□□ -1.08
USP11-211ENST00000489111 PDLIM4P50479 330 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 HTD2P86397 168 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 DHRS2Q13268 280 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 GNMTQ14749 295 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 LTC4SQ16873 150 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 CR1LQ2VPA4 569 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 PHLDA2Q53GA4 152 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 TMEM128Q5BJH2 165 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 CD276Q5ZPR3 534 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 SGPP2Q8IWX5 399 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 CMTM1Q8IZ96 169 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 FGFRL1Q8N441 504 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 OR52L2PQ8NGH6 319 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 OR10V1Q8NGI7 309 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 OR52B4Q8NGK2 314 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 CASTOR1Q8WTX7 329 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 CHAC2Q8WUX2 184 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 RTBDNQ9BSG5 229 aaPredicted RBP8.3□□□□□ -1.08
USP11-211ENST00000489111 NARFLQ9H6Q4 476 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 C19orf12Q9NSK7 152 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 CLN8Q9UBY8 286 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms