RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 PRDM13Q9H4Q3 707 aa14.02□□□□□ -0.17
VIM-205ENST00000485947 CTSZQ9UBR2 303 aa14.02□□□□□ -0.17
VIM-205ENST00000485947 C22orf46C9J442 243 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 HAX1O00165 279 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 TMPRSS2O15393 492 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 CD74P04233 296 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 AKAIN1P0CW23 69 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 GABRA2P47869 451 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 ZNF788Q6ZQV5 615 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 Q6ZS49 121 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 MOB1BQ7L9L4 216 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 GAPTQ8N292 157 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 SIGLECL1Q8N7X8 197 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 OR5T2Q8NGG2 359 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 FAM234AQ9H0X4 552 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 PPA2Q9H2U2 334 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 CHMP1AQ9HD42 196 aaPredicted RBP14.01□□□□□ -0.17
VIM-205ENST00000485947 MGAT4AQ9UM21 535 aa14.01□□□□□ -0.17
VIM-205ENST00000485947 ZNF736B4DX44 427 aaPredicted RBP14□□□□□ -0.17
VIM-205ENST00000485947 HSPB6O14558 160 aa14□□□□□ -0.17
VIM-205ENST00000485947 SIGLEC5O15389 551 aa14□□□□□ -0.17
VIM-205ENST00000485947 PSPNO60542 156 aa14□□□□□ -0.17
VIM-205ENST00000485947 ZNF737O75373 536 aa14□□□□□ -0.17
VIM-205ENST00000485947 GYPAP02724 150 aa14□□□□□ -0.17
VIM-205ENST00000485947 OR3A1P47881 315 aa14□□□□□ -0.17
VIM-205ENST00000485947 GPR157Q5UAW9 335 aa14□□□□□ -0.17
VIM-205ENST00000485947 SLC35E4Q6ICL7 350 aa14□□□□□ -0.17
VIM-205ENST00000485947 STEAP1BQ6NZ63 245 aa14□□□□□ -0.17
VIM-205ENST00000485947 ZNF497Q6ZNH5 498 aa14□□□□□ -0.17
VIM-205ENST00000485947 C17orf107Q6ZR85 190 aa14□□□□□ -0.17
VIM-205ENST00000485947 GVQW1Q8N7I0 195 aa14□□□□□ -0.17
VIM-205ENST00000485947 ASCC1Q8N9N2 400 aaKnown RBP14□□□□□ -0.17
VIM-205ENST00000485947 BEST4Q8NFU0 473 aa14□□□□□ -0.17
VIM-205ENST00000485947 OR5D13Q8NGL4 314 aa14□□□□□ -0.17
VIM-205ENST00000485947 DYRK2Q92630 601 aa14□□□□□ -0.17
VIM-205ENST00000485947 MED30Q96HR3 178 aa14□□□□□ -0.17
VIM-205ENST00000485947 GAFA1Q96PS6 74 aa14□□□□□ -0.17
VIM-205ENST00000485947 HDHD3Q9BSH5 251 aaPredicted RBP14□□□□□ -0.17
VIM-205ENST00000485947 C11orf54Q9H0W9 315 aaPredicted RBP14□□□□□ -0.17
VIM-205ENST00000485947 ZNF286AQ9HBT8 521 aa14□□□□□ -0.17
VIM-205ENST00000485947 ESM1Q9NQ30 184 aa14□□□□□ -0.17
VIM-205ENST00000485947 LINC00854A0A1B0GVQ3 168 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 TMEM82A0PJX8 343 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 K7N7A8 449 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 DVL1O14640 695 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 MGST3O14880 152 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 TAS2R46P59540 309 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 MEF2DQ14814 521 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 METTL11BQ5VVY1 283 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 ZNF880Q6PDB4 577 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 OR4S1Q8NGB4 309 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 PLPPR1Q8TBJ4 325 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 MRPL30Q8TCC3 161 aaKnown RBP13.99□□□□□ -0.17
VIM-205ENST00000485947 C22orf15Q8WYQ4 148 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 SNAPC3Q92966 411 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 CYYR1Q96J86 154 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 ST6GALNAC5Q9BVH7 336 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 HRASLSQ9HDD0 168 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 KPTNQ9Y664 436 aa13.99□□□□□ -0.17
VIM-205ENST00000485947 TRAV40A0A0B4J280 105 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 TMEM30CPA0ZSE6 113 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 FUOMA2VDF0 154 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 NDUFB3O43676 98 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 TOX4O94842 621 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 RAB3DO95716 219 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 CD3DP04234 171 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 RNASE1P07998 156 aaKnown RBP13.98□□□□□ -0.17
VIM-205ENST00000485947 IGHV4-38-2P0DP08 117 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 MMP9P14780 707 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 AMY2BP19961 511 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 IL13RA1P78552 427 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 FOXL1Q12952 345 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 BAMBIQ13145 260 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 ATXN7L3Q14CW9 347 aaPredicted RBP13.98□□□□□ -0.17
VIM-205ENST00000485947 GRK1Q15835 563 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 LRRC10Q5BKY1 277 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 RNASE10Q5GAN6 216 aaKnown RBP13.98□□□□□ -0.17
VIM-205ENST00000485947 RSBN1Q5VWQ0 802 aaPredicted RBP13.98□□□□□ -0.17
VIM-205ENST00000485947 BTN2A1Q7KYR7 527 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 OR4C16Q8NGL9 310 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 OR4K15Q8NH41 348 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 CHPT1Q8WUD6 406 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 NCOR1P1Q9H4R4 102 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 Q9N2K0 584 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 RPUSD1Q9UJJ7 312 aaKnown RBP13.98□□□□□ -0.17
VIM-205ENST00000485947 MAB21L2Q9Y586 359 aa13.98□□□□□ -0.17
VIM-205ENST00000485947 TK1P04183 234 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 HKR1P10072 659 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 HLA-DMAP28067 261 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 ERP29P30040 261 aaKnown RBP13.97□□□□□ -0.17
VIM-205ENST00000485947 KIR2DS4P43632 304 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 KIR2DS1Q14954 304 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 OXA1LQ15070 435 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 TRIM16LQ309B1 348 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 VAX1Q5SQQ9 334 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 OR52W1Q6IF63 320 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 C1orf122Q6ZSJ8 110 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 BCL6BQ8N143 479 aaPredicted RBP13.97□□□□□ -0.17
VIM-205ENST00000485947 TMEM86BQ8N661 226 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 KIR3DL3Q8N743 410 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms