RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 FAM90A15PP0C7V4 464 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 FAM90A13PP0C7W8 464 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 FAM90A14PP0C7W9 464 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 FAM90A24PP0C7X0 464 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 CD33P20138 364 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 MAPK3P27361 379 aaPredicted RBP8.31□□□□□ -1.08
CPSF4-212ENST00000482251 LOXL3P58215 753 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 CD83Q01151 205 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 GPR50Q13585 617 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 GPR176Q14439 515 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 RBM48Q5RL73 367 aaKnown RBP8.31□□□□□ -1.08
CPSF4-212ENST00000482251 OR10K2Q6IF99 312 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 C5orf24Q7Z6I8 188 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 OR8H3Q8N146 312 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 NKAIN3Q8N8D7 197 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 OR10A7Q8NGE5 316 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 NRG4Q8WWG1 115 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 PHF21AQ96BD5 680 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 Q96M66 194 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 MND1Q9BWT6 205 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 SPACA1Q9HBV2 294 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 PLCXD1Q9NUJ7 323 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 PEX16Q9Y5Y5 336 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 PSMB11A5LHX3 300 aa8.3□□□□□ -1.08
CPSF4-212ENST00000482251 NCBP2LA6PVI3 153 aaKnown RBP8.3□□□□□ -1.08
CPSF4-212ENST00000482251 ZNF736B4DX44 427 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-212ENST00000482251 M0QZK8 103 aa8.3□□□□□ -1.08
CPSF4-212ENST00000482251 SPINT2O43291 252 aa8.3□□□□□ -1.08
CPSF4-212ENST00000482251 ORC5O43913 435 aa8.3□□□□□ -1.08
CPSF4-212ENST00000482251 HBZP02008 142 aa8.3□□□□□ -1.08
CPSF4-212ENST00000482251 IGLL1P15814 213 aa8.3□□□□□ -1.08
CPSF4-212ENST00000482251 RCC1P18754 421 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-212ENST00000482251 GZMHP20718 246 aa8.3□□□□□ -1.08
CPSF4-212ENST00000482251 ZNF816Q0VGE8 651 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-212ENST00000482251 GNMTQ14749 295 aa8.3□□□□□ -1.08
CPSF4-212ENST00000482251 MED22Q15528 200 aa8.3□□□□□ -1.08
CPSF4-212ENST00000482251 ACSM3Q53FZ2 586 aa8.3□□□□□ -1.08
CPSF4-212ENST00000482251 SIGIRRQ6IA17 410 aa8.3□□□□□ -1.08
CPSF4-212ENST00000482251 LYPD6Q86Y78 171 aa8.3□□□□□ -1.08
CPSF4-212ENST00000482251 TSSC4Q9Y5U2 329 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-212ENST00000482251 SERPINE3A8MV23 424 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 PDCD6O75340 191 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 GAPDHP04406 335 aaKnown RBP8.29□□□□□ -1.08
CPSF4-212ENST00000482251 HSMCR30P0CW71 290 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 IL3RAP26951 378 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 GP2P55259 537 aaKnown RBP8.29□□□□□ -1.08
CPSF4-212ENST00000482251 SPHARQ15513 63 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 C6orf141Q5SZD1 244 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 C6orf183Q5T699 404 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 KPRPQ5T749 579 aaPredicted RBP8.29□□□□□ -1.08
CPSF4-212ENST00000482251 LIPKQ5VXJ0 399 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 SLC16A12Q6ZSM3 486 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 C18orf65Q6ZTR6 163 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 SLC35E3Q7Z769 313 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 LRRTM1Q86UE6 522 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 THNSL2Q86YJ6 484 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 ZNF439Q8NDP4 499 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 OR52M1Q8NGK5 317 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 RTN4IP1Q8WWV3 396 aaPredicted RBP8.29□□□□□ -1.08
CPSF4-212ENST00000482251 TMEM203Q969S6 136 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 MRPS24Q96EL2 167 aaKnown RBP8.29□□□□□ -1.08
CPSF4-212ENST00000482251 EAF1Q96JC9 268 aaPredicted RBP8.29□□□□□ -1.08
CPSF4-212ENST00000482251 NICN1Q9BSH3 213 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 CST11Q9H112 138 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 DCLRE1BQ9H816 532 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 TAF9BQ9HBM6 251 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 LSM2Q9Y333 95 aaKnown RBP8.29□□□□□ -1.08
CPSF4-212ENST00000482251 NOTCH3Q9UM47 2321 aa8.29□□□□□ -1.08
CPSF4-212ENST00000482251 ERICH4A6NGS2 130 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 LINC01548A6NM66 108 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 NUDT19A8MXV4 375 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 CD1AP06126 327 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 VSIG8P0DPA2 414 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 FUT3P21217 361 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 MYF6P23409 242 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 PPP1CCP36873 323 aaKnown RBP8.28□□□□□ -1.08
CPSF4-212ENST00000482251 ZNF134P52741 427 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 RPS25P62851 125 aaKnown RBP8.28□□□□□ -1.08
CPSF4-212ENST00000482251 HSD17B12Q53GQ0 312 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 CT45A1Q5HYN5 189 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 FOXB2Q5VYV0 432 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 Q6ZPA2 131 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 SLC25A48Q6ZT89 311 aaKnown RBP8.28□□□□□ -1.08
CPSF4-212ENST00000482251 CEACAM19Q7Z692 300 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 TGIF2LXQ8IUE1 241 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 IZUMO1Q8IYV9 350 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 LINC00311Q8N616 119 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 OR52L2PQ8NGH6 319 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 CT45A3Q8NHU0 189 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 MRPL30Q8TCC3 161 aaKnown RBP8.28□□□□□ -1.08
CPSF4-212ENST00000482251 MRAPQ8TCY5 172 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 THRSPQ92748 146 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 UFD1Q92890 307 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 SULT4A1Q9BR01 284 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 UQCC2Q9BRT2 126 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 TMEM59Q9BXS4 323 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 CCDC90BQ9GZT6 254 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 OR2S2Q9NQN1 319 aa8.28□□□□□ -1.08
CPSF4-212ENST00000482251 AURKAIP1Q9NWT8 199 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-212ENST00000482251 SCN3BQ9NY72 215 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms