RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 MRPS28Q9Y2Q9 187 aaKnown RBP7.4□□□□□ -1.22
GPNMB-211ENST00000479625 CEPT1Q9Y6K0 416 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 DNAH17Q9UFH2 4485 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 DNAH11Q96DT5 4516 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 SDCBPO00560 298 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-211ENST00000479625 DEDDO75618 318 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 CST1P01037 141 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 HLA-DRB1P01911 266 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 OCM2P0CE71 109 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 OCMP0CE72 109 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-211ENST00000479625 UBCP0CG48 685 aaKnown RBP7.39□□□□□ -1.23
GPNMB-211ENST00000479625 ZNF20P17024 532 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 VHLP40337 213 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 GALEQ14376 348 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 ZSCAN26Q16670 478 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 C19orf54Q5BKX5 351 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 SLC16A12Q6ZSM3 486 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 UTS2BQ765I0 119 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 LINC00311Q8N616 119 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 MINDY2Q8NBR6 621 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 OR10A7Q8NGE5 316 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 CNIH3Q8TBE1 160 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 SPSB1Q96BD6 273 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 C10orf35Q96D05 121 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 BARHL1Q9BZE3 327 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 A3GALT2U3KPV4 340 aa7.39□□□□□ -1.23
GPNMB-211ENST00000479625 PKD1P98161 4303 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 A0A1W2PQL4 384 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-211ENST00000479625 IZUMO1RA6ND01 250 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 C15orf65H3BRN8 121 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 HSPB1P04792 205 aaKnown RBP7.38□□□□□ -1.23
GPNMB-211ENST00000479625 IL3RAP26951 378 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 LSAMPQ13449 338 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 LRRC36Q1X8D7 754 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 PIGYQ3MUY2 71 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 FAM98BQ52LJ0 330 aaKnown RBP7.38□□□□□ -1.23
GPNMB-211ENST00000479625 LPCAT4Q643R3 524 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 ZNF439Q8NDP4 499 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 CCDC54Q8NEL0 328 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 OR51A4Q8NGJ6 313 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 OR10K1Q8NGX5 313 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 GATAD1Q8WUU5 269 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 ST6GALNAC5Q9BVH7 336 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 ELOVL1Q9BW60 279 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 ANKRD60Q9BZ19 345 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 WFDC10AQ9H1F0 79 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 ZNF556Q9HAH1 456 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 MBNL3Q9NUK0 354 aaKnown RBP7.38□□□□□ -1.23
GPNMB-211ENST00000479625 GFOD1Q9NXC2 390 aa7.38□□□□□ -1.23
GPNMB-211ENST00000479625 FOXA2Q9Y261 457 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-211ENST00000479625 METTL15A6NJ78 407 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 TXNL1O43396 289 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 RGS11O94810 467 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 TMEM225BP0DP42 221 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 RAP2AP10114 183 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 ZNF137PP52743 207 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 ACTBP60709 375 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 PAX5Q02548 391 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 TP53I3Q53FA7 332 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 AADACL4Q5VUY2 407 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 LINC00322Q6ZN03 302 aaPredicted RBP7.37□□□□□ -1.23
GPNMB-211ENST00000479625 SLC25A48Q6ZT89 311 aaKnown RBP7.37□□□□□ -1.23
GPNMB-211ENST00000479625 GTSCR1Q86UQ5 136 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 SAXO1Q8IYX7 474 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 TCEANCQ8N8B7 351 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 OR10V1Q8NGI7 309 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 CCDC107Q8WV48 283 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 ARL11Q969Q4 196 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 FLYWCH2Q96CP2 140 aaKnown RBP7.37□□□□□ -1.23
GPNMB-211ENST00000479625 MS4A10Q96PG2 267 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 TEX12Q9BXU0 123 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 NCOR1P1Q9H4R4 102 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 RHOFQ9HBH0 211 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 ARL8BQ9NVJ2 186 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 FAM118AQ9NWS6 357 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 CHCHD3Q9NX63 227 aaKnown RBP7.37□□□□□ -1.23
GPNMB-211ENST00000479625 GNG8Q9UK08 70 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 ADAM30Q9UKF2 790 aa7.37□□□□□ -1.23
GPNMB-211ENST00000479625 CXorf65A6NEN9 183 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 GNGT2O14610 69 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 NBR2O15453 112 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 ZNF134P52741 427 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 CRISP1P54107 249 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 TPPP2P59282 170 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 NANOS3P60323 173 aaKnown RBP7.36□□□□□ -1.23
GPNMB-211ENST00000479625 MS4A2Q01362 244 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 GK3PQ14409 553 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 PTGES3Q15185 160 aaKnown RBP7.36□□□□□ -1.23
GPNMB-211ENST00000479625 C5orf64Q2M2E5 130 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 NXNL2Q5VZ03 156 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 DHFR2Q86XF0 187 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 C8orf31Q8N9H6 132 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 SUMF2Q8NBJ7 301 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 OR10H4Q8NGA5 316 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 OR52M1Q8NGK5 317 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 OR13C3Q8NGS6 347 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 IL4I1Q96RQ9 567 aa7.36□□□□□ -1.23
GPNMB-211ENST00000479625 ELAC2Q9BQ52 826 aaKnown RBP7.36□□□□□ -1.23
GPNMB-211ENST00000479625 FAM103A1Q9BTL3 118 aaKnown RBP7.36□□□□□ -1.23
GPNMB-211ENST00000479625 DPCDQ9BVM2 203 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms