RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 EPHA8P29322 1005 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-210ENST00000471181 C3AR1Q16581 482 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 METRNLQ641Q3 311 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 LEMD1Q68G75 181 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 ZNF770Q6IQ21 691 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-210ENST00000471181 TEPPQ6URK8 271 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 CCL4L1Q8NHW4 92 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 SLC25A19Q9HC21 320 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 STARD10Q9Y365 291 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 MYO10Q9HD67 2058 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 A0A1B0GWB2 263 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 C9JCJ5 164 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 CAPZBP47756 277 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 HIST1H1AQ02539 215 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-210ENST00000471181 MBNL2Q5VZF2 373 aaKnown RBP6.07□□□□□ -1.44
BRCA1-210ENST00000471181 LHX8Q68G74 356 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 KIRREL2Q6UWL6 708 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 OVCH2Q7RTZ1 564 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 SLC25A42Q86VD7 318 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 ATOH7Q8N100 152 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 OR4A5Q8NH83 315 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 GNRHR2Q96P88 292 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 PDCD6O75340 191 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 DXOO77932 396 aaKnown RBP6.07□□□□□ -1.44
BRCA1-210ENST00000471181 COX6B1P14854 86 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 MPLP40238 635 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 LY6EQ16553 131 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 CLPPQ16740 277 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-210ENST00000471181 WDR38Q5JTN6 314 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 ZNF385CQ66K41 422 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-210ENST00000471181 SLC25A34Q6PIV7 304 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 DLEU7Q6UYE1 221 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 GAPTQ8N292 157 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 GVQW1Q8N7I0 195 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 CDCA4Q9BXL8 241 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 FSCN3Q9NQT6 498 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 TMEM106BQ9NUM4 274 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 IL36RNQ9UBH0 155 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 CLN8Q9UBY8 286 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 SMAD7O15105 426 aaKnown RBP6.06□□□□□ -1.44
BRCA1-210ENST00000471181 OR2A4O95047 310 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 EPPINO95925 133 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 CNTFRP26992 372 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 GALNSP34059 522 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 CDC20Q12834 499 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 TMEM249Q2WGJ8 235 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 MARVELD3Q96A59 401 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 OR2A7Q96R45 310 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 CA10Q9NS85 328 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 NTMQ9P121 344 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 RNF7Q9UBF6 113 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 LAMB2P55268 1798 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 LEPROTL1O95214 131 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 CA1P00915 261 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-210ENST00000471181 AMY1AP04745 511 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 TYMSP04818 313 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 SOX8P57073 446 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 TMEM171Q8WVE6 324 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 GALNT14Q96FL9 552 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 OR2V2Q96R30 315 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 DIRC2Q96SL1 478 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 METTL1Q9UBP6 276 aaKnown RBP6.06□□□□□ -1.44
BRCA1-210ENST00000471181 KIAA1551Q9HCM1 1747 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 GDF9O60383 454 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 PLPPR5Q32ZL2 321 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 FAM74A3Q4VXF1 159 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 RAB33BQ9H082 229 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 TRAV8-6A0A0B4J262 113 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 SMIM6P0DI80 62 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 GPX2P18283 190 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 GZMKP49863 264 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 SUMO3P55854 103 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-210ENST00000471181 HBBP68871 147 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 FZD5Q13467 585 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 OR6X1Q8NH79 312 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 C2orf88Q9BSF0 95 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 OPN4Q9UHM6 478 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 LINC00862A6NCI5 91 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 THY1P04216 161 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 SSTR5P35346 364 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 SKP2Q13309 424 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 IBA57Q5T440 356 aaKnown RBP6.06□□□□□ -1.44
BRCA1-210ENST00000471181 CYB5R2Q6BCY4 276 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 FAHD1Q6P587 224 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 AMER3Q8N944 861 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 ST6GALNAC3Q8NDV1 305 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 MRGPRFQ96AM1 343 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 KIR2DL4Q99706 377 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 CCL28Q9NRJ3 127 aa6.06□□□□□ -1.44
BRCA1-210ENST00000471181 SLC25A10Q9UBX3 287 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-210ENST00000471181 IGHV3-72A0A0B4J1Y9 119 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 TRAV8-2A0A0B4J237 113 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 J3QR06 171 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 NKX2-8O15522 239 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 ZNF688P0C7X2 276 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 IL11RAQ14626 422 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 C1orf220Q5T0J3 134 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 ANKRD37Q7Z713 158 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 LRRC3BQ96PB8 259 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 NUDT16L1Q9BRJ7 211 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms