RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 HOGA1Q86XE5 327 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 R3HDM4Q96D70 268 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 POM121Q96HA1 1249 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 ZDHHC11Q9H8X9 412 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 SLC25A10Q9UBX3 287 aaPredicted RBP13.09□□□□□ -0.31
LIMS2-213ENST00000469300 PRNDQ9UKY0 176 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 INSIG2Q9Y5U4 225 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 KCNMB2Q9Y691 235 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 DOCK6Q96HP0 2047 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 UBE2L5PA0A1B0GUS4 154 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 KRTDAPP60985 99 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 ST3GAL2Q16842 350 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 NCR3LG1Q68D85 454 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 Q6ZT83 130 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 NECAP1Q8NC96 275 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 OR8G5Q8NG78 346 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 AAMDCQ9H7C9 122 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 CISD1Q9NZ45 108 aaKnown RBP13.09□□□□□ -0.31
LIMS2-213ENST00000469300 TMEM218A2RU14 115 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 ERVFRD-1P60508 538 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 MEGF10Q96KG7 1140 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 ICE1Q9Y2F5 2266 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 NTN3O00634 580 aaPredicted RBP13.08□□□□□ -0.32
LIMS2-213ENST00000469300 SLC25A4P12235 298 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 CNN1P51911 297 aaKnown RBP13.08□□□□□ -0.32
LIMS2-213ENST00000469300 RPS4XP62701 263 aaKnown RBP13.08□□□□□ -0.32
LIMS2-213ENST00000469300 IL24Q13007 206 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 TBC1D26Q86UD7 250 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 TPPP3Q9BW30 176 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 NCOR1O75376 2440 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 DUXBA0A1W2PPF3 345 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 CLDN34H7C241 214 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 LGALS7P47929 136 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 TNFSF10P50591 281 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 PKIAP61925 76 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 FAM219AQ8IW50 185 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 FBLIM1Q8WUP2 373 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 RNF2Q99496 336 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 SLC45A2Q9UMX9 530 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 LHFPL6Q9Y693 200 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 H0Y8G0 127 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 MPC2O95563 127 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 CDS2O95674 445 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 NRN1LQ496H8 165 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 FDX2Q6P4F2 183 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 SAXO1Q8IYX7 474 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 GCSAMQ8N6F7 178 aa13.08□□□□□ -0.32
LIMS2-213ENST00000469300 RBP4P02753 201 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 LINC00271P0C7V0 271 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 TMEM11P17152 192 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 CCL8P80075 99 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 LINC00518Q8N0U6 118 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 C9orf62Q8N4C0 152 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 OR4F17Q8NGA8 305 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 RASL11BQ9BPW5 248 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 FAM103A1Q9BTL3 118 aaKnown RBP13.07□□□□□ -0.32
LIMS2-213ENST00000469300 Q9N2K0 584 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 BET1LQ9NYM9 111 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 ZNF835Q9Y2P0 537 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 OR5H1A6NKK0 313 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 PIGYQ3MUY2 71 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 C1orf100Q5SVJ3 147 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 PET117Q6UWS5 81 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 MISP3Q96FF7 219 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 SRXN1Q9BYN0 137 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 SF3B6Q9Y3B4 125 aaKnown RBP13.07□□□□□ -0.32
LIMS2-213ENST00000469300 ZNF785A8K8V0 405 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 DVL1O14640 695 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 RAB32Q13637 225 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 TCTEX1D1Q8N7M0 179 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 OR1L4Q8NGR5 311 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 TMEM54Q969K7 222 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 FLYWCH2Q96CP2 140 aaKnown RBP13.07□□□□□ -0.32
LIMS2-213ENST00000469300 LRFN3Q9BTN0 628 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 MIXL1Q9H2W2 232 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 SCN5AQ14524 2016 aa13.07□□□□□ -0.32
LIMS2-213ENST00000469300 SYNGR2O43760 224 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 PRF1P14222 555 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 C17orf82Q86X59 251 aaPredicted RBP13.06□□□□□ -0.32
LIMS2-213ENST00000469300 ADAMTS17Q8TE56 1095 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 OR2V2Q96R30 315 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 ARL2-SNX15V9GYD0 113 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 RLFQ13129 1914 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 SLC25A42Q86VD7 318 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 C1orf162Q8NEQ5 155 aaPredicted RBP13.06□□□□□ -0.32
LIMS2-213ENST00000469300 OR52L2PQ8NGH6 319 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 DYRK2Q92630 601 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 MS4A10Q96PG2 267 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 LOC390937A0A1W2PQ73 354 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 TIMM23BQ5SRD1 257 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 TMEM65Q6PI78 240 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 RPUSD4Q96CM3 377 aaKnown RBP13.06□□□□□ -0.32
LIMS2-213ENST00000469300 SNX22Q96L94 193 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 V9GYH0 126 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 MEX3AA1L020 520 aaKnown RBP13.06□□□□□ -0.32
LIMS2-213ENST00000469300 ZNF320A2RRD8 509 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 ATXN7O15265 892 aaPredicted RBP13.06□□□□□ -0.32
LIMS2-213ENST00000469300 INHBBP09529 407 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 TMEM30BQ3MIR4 351 aa13.06□□□□□ -0.32
LIMS2-213ENST00000469300 NCMAPQ5T1S8 102 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms