RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 DUX4L3P0CJ86 424 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 DUX4L4P0CJ87 422 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 DUX4L5P0CJ88 424 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 DUX4L6P0CJ89 424 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 DUX4L7P0CJ90 424 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 RCC1P18754 421 aaPredicted RBP8.55□□□□□ -1.04
MSH5-213ENST00000468136 S100A1P23297 94 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 UCP1P25874 307 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 GABRA2P47869 451 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 RAB14P61106 215 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 UBA52P62987 128 aaKnown RBP8.55□□□□□ -1.04
MSH5-213ENST00000468136 IL15RAQ13261 267 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 ATXN7L3Q14CW9 347 aaPredicted RBP8.55□□□□□ -1.04
MSH5-213ENST00000468136 IAH1Q2TAA2 248 aaPredicted RBP8.55□□□□□ -1.04
MSH5-213ENST00000468136 C20orf204Q6ZNR8 217 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 GALNT11Q8NCW6 608 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 OR8H1Q8NGG4 311 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 ANGPTL6Q8NI99 470 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 GLYATL2Q8WU03 294 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 SECTM1Q8WVN6 248 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 MSI2Q96DH6 328 aaKnown RBP8.55□□□□□ -1.04
MSH5-213ENST00000468136 C18orf12Q96KH6 178 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 ARL6Q9H0F7 186 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 ZNF665Q9H7R5 613 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 PLEKHF2Q9H8W4 249 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 LIN7CQ9NUP9 197 aaKnown RBP8.55□□□□□ -1.04
MSH5-213ENST00000468136 DUX4Q9UBX2 424 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 LPAR3Q9UBY5 353 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 UBQLN2Q9UHD9 624 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 KIF25Q9UIL4 384 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 JPT1Q9UK76 154 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 UBE2J1Q9Y385 318 aaPredicted RBP8.55□□□□□ -1.04
MSH5-213ENST00000468136 RNF115Q9Y4L5 304 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 SPTA1P02549 2419 aa8.55□□□□□ -1.04
MSH5-213ENST00000468136 ESPL1Q14674 2120 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 SHANK1Q9Y566 2161 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 CLEC18AA5D8T8 446 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 SHISA9B4DS77 424 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 LGALS8O00214 317 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 WNT9BO14905 357 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 PHF1O43189 567 aaPredicted RBP8.54□□□□□ -1.04
MSH5-213ENST00000468136 GOSR1O95249 250 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 CXCL2P19875 107 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 VDAC1P21796 283 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 F2RP25116 425 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 PLA2G5P39877 138 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 P2RX3P56373 397 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 SNRPD2P62316 118 aaKnown RBP8.54□□□□□ -1.04
MSH5-213ENST00000468136 TLE1Q04724 770 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 CATR1Q13166 79 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 PHLDA2Q53GA4 152 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 Q5BKY6 102 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 GGNBP1Q5YKI7 109 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 STUMQ69YW2 141 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 C22orf34Q6ZV56 151 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 TBC1D26Q86UD7 250 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 ZNF695Q8IW36 515 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 CD177Q8N6Q3 437 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 CLEC18CQ8NCF0 446 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 ZNF680Q8NEM1 530 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 OR10A7Q8NGE5 316 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 C14orf79Q96F83 325 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 PHYHIPLQ96FC7 376 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 PLPPR2Q96GM1 343 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 SEC22AQ96IW7 307 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 FAM210AQ96ND0 272 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 SHARPINQ9H0F6 387 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 HEXA-AS1Q9H8Q6 139 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 PLEKHA2Q9HB19 425 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 DYNLRB1Q9NP97 96 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 RDH8Q9NYR8 311 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 CACFD1Q9UGQ2 172 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 GAB2Q9UQC2 676 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 LAMP3Q9UQV4 416 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 RBM7Q9Y580 266 aaKnown RBP8.54□□□□□ -1.04
MSH5-213ENST00000468136 CEP295Q9C0D2 2601 aa8.54□□□□□ -1.04
MSH5-213ENST00000468136 IGKV1D-17A0A075B6S4 117 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.53□□□□□ -1.04
MSH5-213ENST00000468136 ODAMA1E959 279 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 C12orf77C9JDV5 145 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 CCSO14618 274 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 YPEL1O60688 119 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 PGLYRP1O75594 196 aaPredicted RBP8.53□□□□□ -1.04
MSH5-213ENST00000468136 HBZP02008 142 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 SERPINE2P07093 398 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 HOXB5P09067 269 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 MMP9P14780 707 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 CEACAM6P40199 344 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 RAB7AP51149 207 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 MEF2CQ06413 473 aaPredicted RBP8.53□□□□□ -1.04
MSH5-213ENST00000468136 AESQ08117 197 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 Q3ZCU0 254 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 C4orf17Q53FE4 359 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 THOC7Q6I9Y2 204 aaKnown RBP8.53□□□□□ -1.04
MSH5-213ENST00000468136 ADAM5Q6NVV9 412 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 ZNF66Q6ZN08 573 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 ZNF818PQ6ZRF7 136 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 ZNF645Q8N7E2 425 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 LRRC20Q8TCA0 184 aa8.53□□□□□ -1.04
MSH5-213ENST00000468136 CD300LFQ8TDQ1 290 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms