RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PPIAL4EA0A075B759 164 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 PPIAL4DF5H284 164 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 TXNL1O43396 289 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 PPIAL4FP0DN26 164 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 ZP3P21754 424 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 DVL1P1P54792 670 aaPredicted RBP11.89□□□□□ -0.51
BRAT1-203ENST00000467558 COL10A1Q03692 680 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 ZNF345Q14585 488 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 TMEM65Q6PI78 240 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 PIPOXQ9P0Z9 390 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 PPIAL4AQ9Y536 164 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 OR2H2O95918 312 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 NQO2P16083 231 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 IGSF11Q5DX21 431 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 FFAR4Q5NUL3 377 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 GAB2Q9UQC2 676 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 SYNGR3O43761 229 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 FAM219AQ8IW50 185 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 SHISA5Q8N114 240 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 OR8B3Q8NGG8 313 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 CHAC2Q8WUX2 184 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 TMEM230Q96A57 120 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 OR8B2Q96RD0 313 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 LRFN3Q9BTN0 628 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 POMT1Q9Y6A1 747 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 DOCK9Q9BZ29 2069 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 A0A1W2PN81 502 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 NCBP2LA6PVI3 153 aaKnown RBP11.89□□□□□ -0.51
BRAT1-203ENST00000467558 ZNF705FA8MVS1 300 aaPredicted RBP11.89□□□□□ -0.51
BRAT1-203ENST00000467558 J3QRE1 110 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 ADAM10O14672 748 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 ZNF705DP0CH99 300 aaPredicted RBP11.89□□□□□ -0.51
BRAT1-203ENST00000467558 ZNF705BP0CI00 300 aaPredicted RBP11.89□□□□□ -0.51
BRAT1-203ENST00000467558 CHRNA7P36544 502 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 RPL31P62899 125 aaKnown RBP11.89□□□□□ -0.51
BRAT1-203ENST00000467558 TMEM255AQ5JRV8 349 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 WSB1Q9Y6I7 421 aa11.89□□□□□ -0.51
BRAT1-203ENST00000467558 IGHV3OR15-7A0A075B7D8 119 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 ETFRF1Q6IPR1 90 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 KDF1Q8NAX2 398 aaPredicted RBP11.88□□□□□ -0.51
BRAT1-203ENST00000467558 DTD1Q8TEA8 209 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 MARS2Q96GW9 593 aaKnown RBP11.88□□□□□ -0.51
BRAT1-203ENST00000467558 DLL3Q9NYJ7 618 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 LPAR3Q9UBY5 353 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 TNFSF18Q9UNG2 199 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 PPP1CCP36873 323 aaKnown RBP11.88□□□□□ -0.51
BRAT1-203ENST00000467558 HSD17B13Q7Z5P4 300 aaPredicted RBP11.88□□□□□ -0.51
BRAT1-203ENST00000467558 MAP1LC3B2A6NCE7 125 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 CD74P04233 296 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 SCTP09683 121 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 SFTA3P0C7M3 94 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 NPBWR1P48145 328 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 ZNF826PQ6ZT77 177 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 TVP23CQ96ET8 276 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 MAP1LC3BQ9GZQ8 125 aa11.88□□□□□ -0.51
BRAT1-203ENST00000467558 MFNGO00587 321 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 OPRK1P41145 380 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 DYNLT3P51808 116 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 TMEM50BP56557 158 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 DCAF12L2Q5VW00 463 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 NCR3LG1Q68D85 454 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 SMIM15Q7Z3B0 74 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 ITLN1Q8WWA0 313 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 ELF5Q9UKW6 265 aaPredicted RBP11.87□□□□□ -0.51
BRAT1-203ENST00000467558 V9GYS6 101 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 hCG_38984A0A1B0GV85 526 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 PPP1R2P9O14990 202 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 CT45A10P0DMU9 189 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 PSG2P11465 335 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 MPV17P39210 176 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 TGIF2LYQ8IUE0 185 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 TGIF2LXQ8IUE1 241 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 ATP5SQ99766 215 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 CABLES2Q9BTV7 478 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 ZDHHC8Q9ULC8 765 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 NBASA2RRP1 2371 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 A0A1B0GTI1 187 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 MBPP02686 304 aaPredicted RBP11.87□□□□□ -0.51
BRAT1-203ENST00000467558 GAS1P54826 345 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 KIAA0141Q14154 515 aaPredicted RBP11.87□□□□□ -0.51
BRAT1-203ENST00000467558 ABLIM2Q6H8Q1 611 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 TPRX1Q8N7U7 411 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 MOB3AQ96BX8 217 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 SLC2A8Q9NY64 477 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 CLN8Q9UBY8 286 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 IL19Q9UHD0 177 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 SULT1A1P50225 295 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 UBE2G2P60604 165 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 RPL11P62913 178 aaKnown RBP11.87□□□□□ -0.51
BRAT1-203ENST00000467558 SPINK9Q5DT21 86 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 TMEM88Q6PEY1 159 aa11.87□□□□□ -0.51
BRAT1-203ENST00000467558 ZNF837Q96EG3 531 aaPredicted RBP11.87□□□□□ -0.51
BRAT1-203ENST00000467558 MDC1Q14676 2089 aaKnown RBP11.86□□□□□ -0.51
BRAT1-203ENST00000467558 ATP6V1G2-DDX39BF2Z307 99 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 SCO1O75880 301 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 HBZP02008 142 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 ADRA2AP08913 450 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 EWSR1Q01844 656 aaKnown RBP eCLIP11.86□□□□□ -0.51
BRAT1-203ENST00000467558 OVCH2Q7RTZ1 564 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 ANGPTL6Q8NI99 470 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms