RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 TMEM269A0A1B0GVZ9 245 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 ENSAO43768 121 aaKnown RBP6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 SLC35G4P0C7Q5 338 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 SNRPBP14678 240 aaKnown RBP6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 NDUFA6P56556 154 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 RAB35Q15286 201 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 SRSF7Q16629 238 aaKnown RBP eCLIP6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 ENTPD8Q5MY95 495 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 LEG1Q6P5S2 330 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 HMGN2P46Q86SG4 172 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 LINC01551Q86U37 167 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 LYG1Q8N1E2 194 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 TPRX1Q8N7U7 411 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 IP6K3Q96PC2 410 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 IL17FQ96PD4 163 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 OR11A1Q9GZK7 315 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 KLK11Q9UBX7 282 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 FZR1Q9UM11 496 aa6.52□□□□□ -1.37
SPTBN1-204ENST00000467371 ZNF587BE7ETH6 402 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 MT-CO3P00414 261 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 CATP04040 527 aaKnown RBP6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 UCHL1P09936 223 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 TPT1P13693 172 aaKnown RBP6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 PTH2RP49190 550 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 ZNF133P52736 654 aaPredicted RBP6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 DVL1P1P54792 670 aaPredicted RBP6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 PFN3P60673 137 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 CD164Q04900 197 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 MYBPHQ13203 477 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 TOMM20LQ6UXN7 152 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST2H3AQ71DI3 136 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 LINC01561Q8N1V8 128 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 OR5K2Q8NHB8 316 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 IRF7Q92985 503 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 RPUSD4Q96CM3 377 aaKnown RBP6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 OR7D2Q96RA2 312 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 ADOQ96SZ5 270 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 CYTL1Q9NRR1 136 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 ZNF230Q9UIE0 474 aaPredicted RBP6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 ASF1AQ9Y294 204 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HDGFL3Q9Y3E1 203 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 THSD7BQ9C0I4 1608 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 LAMP1P11279 417 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 RHOBP62745 196 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST3H3Q16695 136 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 RSPO4Q2I0M5 234 aaPredicted RBP6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 ZNF791Q3KP31 576 aaPredicted RBP6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 FAM27D1Q5T7N8 215 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 NOXRED1Q6NXP6 359 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 C16orf82Q7Z2V1 217 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 BAP18Q8IXM2 172 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 BEST3Q8N1M1 668 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 ZADH2Q8N4Q0 377 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 TOMM40LQ969M1 308 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 GALMQ96C23 342 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 FOXJ2Q9P0K8 574 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 OARD1Q9Y530 152 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 A0A0G2JN53 185 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 K7ERU9 68 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST1H2BKO60814 126 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST1H2BJP06899 126 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 GZMBP10144 247 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HMGA1P17096 107 aaKnown RBP6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST1H2BOP23527 126 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 RPL12P30050 165 aaKnown RBP6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST1H2BBP33778 126 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 PDX1P52945 283 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST1H2BDP58876 126 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST1H2BCP62807 126 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 PSG4Q00888 419 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST2H2BEQ16778 126 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 OR4D11Q8NGI4 311 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 RND1Q92730 232 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST1H2BHQ93079 126 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 ADGRG7Q96K78 797 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 TRIB3Q96RU7 358 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST1H2BNQ99877 126 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 HIST1H2BMQ99879 126 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 ZNF665Q9H7R5 613 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 OR1A1Q9P1Q5 309 aa6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 LSM7Q9UK45 103 aaKnown RBP6.51□□□□□ -1.37
SPTBN1-204ENST00000467371 ARID1BQ8NFD5 2236 aaPredicted RBP6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 PLA2G1BP04054 148 aaKnown RBP6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 IGFBP3P17936 291 aaPredicted RBP6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 P2RX1P51575 399 aa6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 TCTAP57738 103 aa6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 TAS2R43P59537 309 aa6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 CR1LQ2VPA4 569 aa6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 ZNF620Q6ZNG0 422 aa6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 GATD1Q8NB37 220 aa6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 GPR148Q8TDV2 347 aa6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 OR51I1Q9H343 314 aa6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 ISG20L2Q9H9L3 353 aaKnown RBP6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 TPSG1Q9NRR2 321 aa6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 FLRT3Q9NZU0 649 aa6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 AK6Q9Y3D8 172 aaKnown RBP6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 RFNGQ9Y644 331 aa6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 NINQ8N4C6 2090 aa6.5□□□□□ -1.37
SPTBN1-204ENST00000467371 MYO10Q9HD67 2058 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms