RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SEBOXQ9HB31 216 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-215ENST00000465457 PAIP2BQ9ULR5 123 aaKnown RBP11.55□□□□□ -0.56
HDAC6-215ENST00000465457 NBEAL2Q6ZNJ1 2754 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 C9orf170A2RU37 121 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 A6NLC8 198 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 FAM157AC9JC47 383 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 F5H5P2 479 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 SLC22A5O76082 557 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 DIRAS3O95661 229 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 KNG1P01042 644 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 CTSDP07339 412 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-215ENST00000465457 GRPP07492 148 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 ZNF44P15621 663 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 NKX2-5P52952 324 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-215ENST00000465457 UCP3P55916 312 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 DHODHQ02127 395 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 MIDNQ504T8 468 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 AWAT1Q58HT5 328 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 Q6ZR03 302 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 NLRC3Q7RTR2 1065 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 OR52B4Q8NGK2 314 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 OR2T35Q8NGX2 323 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 COQ8AQ8NI60 647 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 CAPSLQ8WWF8 208 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 MAFIPQ8WZ33 124 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 DIRC2Q96SL1 478 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 ZNF2Q9BSG1 426 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-215ENST00000465457 Q9N2K0 584 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 METRNQ9UJH8 293 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 ZDHHC8Q9ULC8 765 aa11.54□□□□□ -0.56
HDAC6-215ENST00000465457 TRDCB7Z8K6 153 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 H0YL77 283 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 IFNL4K9M1U5 179 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 SDCBPO00560 298 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-215ENST00000465457 GOSR2O14653 212 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 TK1P04183 234 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 PGAM2P15259 253 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 AKR1C4P17516 323 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 TNFSF4P23510 183 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 VAMP1P23763 118 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 FGL1Q08830 312 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 PPP1R1AQ13522 171 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 PAN3Q58A45 887 aaKnown RBP11.53□□□□□ -0.56
HDAC6-215ENST00000465457 ZNF660Q6AZW8 331 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-215ENST00000465457 Q6P435 159 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 SLC38A6Q8IZM9 456 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 OR5M8Q8NGP6 311 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 ERGIC1Q969X5 290 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 MRPL24Q96A35 216 aaKnown RBP11.53□□□□□ -0.56
HDAC6-215ENST00000465457 ZNF488Q96MN9 340 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 VRK1Q99986 396 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-215ENST00000465457 TMPRSS13Q9BYE2 586 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 C5orf66Q9H5L9 145 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 FN3KRPQ9HA64 309 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 ZNF581Q9P0T4 197 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 SLC23A1Q9UHI7 598 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 DUSP13Q9UII6 198 aa11.53□□□□□ -0.56
HDAC6-215ENST00000465457 IGKV1D-8A0A087WSZ0 117 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 TRAV24A0A0B4J272 114 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 SFT2D2O95562 160 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 HAND1O96004 215 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 LMO1P25800 156 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 APOBEC3AP31941 199 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-215ENST00000465457 GATA4P43694 442 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 GMFBP60983 142 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 HERV-K104P61576 105 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 SRSF4Q08170 494 aaKnown RBP11.52□□□□□ -0.57
HDAC6-215ENST00000465457 HIST2H2BDQ6DRA6 164 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 ZNF880Q6PDB4 577 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 WDR82Q6UXN9 313 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 FAM185AQ8N0U4 392 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 BATF2Q8N1L9 274 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 GAPTQ8N292 157 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 LINC01356Q8N9X3 169 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 OR2Z1Q8NG97 314 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 OR4A4PQ8NGN8 299 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 FAM216AQ8WUB2 273 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 MOB3AQ96BX8 217 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 ELMOD3Q96FG2 381 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 GON7Q9BXV9 100 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 WDR13Q9H1Z4 485 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 SLA2Q9H6Q3 261 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 MSL2Q9HCI7 577 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 CA10Q9NS85 328 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 IL36RNQ9UBH0 155 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 OPN4Q9UHM6 478 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 WNK2Q9Y3S1 2297 aa11.52□□□□□ -0.57
HDAC6-215ENST00000465457 KMT2CQ8NEZ4 4911 aaKnown RBP11.52□□□□□ -0.57
HDAC6-215ENST00000465457 PIGBOS1A0A0B4J2F0 54 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 OR5H14A6NHG9 310 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 SLC33A1O00400 549 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-215ENST00000465457 RGS13O14921 159 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 OR2H2O95918 312 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 ZNF728P0DKX0 622 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 GLRA1P23415 457 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 DUSP1P28562 367 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 HILS1P60008 231 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 HLA-DRB3P79483 266 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 PDCD1Q15116 288 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 BRICD5Q6PL45 260 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms