RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 DIRAS2Q96HU8 199 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 ZNF48Q96MX3 618 aaPredicted RBP14.3□□□□□ -0.12
CPSF4-209ENST00000465132 WDFY2Q96P53 400 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 HEXA-AS1Q9H8Q6 139 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 EXTL2Q9UBQ6 330 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 AK3Q9UIJ7 227 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 KBTBD11-OT1A0A1B0GTJ5 212 aa14.29□□□□□ -0.12
CPSF4-209ENST00000465132 NAPSAO96009 420 aa14.29□□□□□ -0.12
CPSF4-209ENST00000465132 EIF4EP06730 217 aaKnown RBP14.29□□□□□ -0.12
CPSF4-209ENST00000465132 RNASE1P07998 156 aaKnown RBP14.29□□□□□ -0.12
CPSF4-209ENST00000465132 MELTFP08582 738 aa14.29□□□□□ -0.12
CPSF4-209ENST00000465132 PRSS3P35030 304 aa14.29□□□□□ -0.12
CPSF4-209ENST00000465132 BPIFB3P59826 476 aa14.29□□□□□ -0.12
CPSF4-209ENST00000465132 ARF6P62330 175 aa14.29□□□□□ -0.12
CPSF4-209ENST00000465132 GUCA2AQ02747 115 aa14.29□□□□□ -0.12
CPSF4-209ENST00000465132 MOGAT2Q3SYC2 334 aa14.29□□□□□ -0.12
CPSF4-209ENST00000465132 ZNF260Q3ZCT1 412 aa14.29□□□□□ -0.12
CPSF4-209ENST00000465132 METAP1DQ6UB28 335 aaPredicted RBP14.29□□□□□ -0.12
CPSF4-209ENST00000465132 TPRX1Q8N7U7 411 aa14.29□□□□□ -0.12
CPSF4-209ENST00000465132 DACT3Q96B18 629 aaPredicted RBP14.29□□□□□ -0.12
CPSF4-209ENST00000465132 AUNIPQ9H7T9 357 aa14.29□□□□□ -0.12
CPSF4-209ENST00000465132 UNKLQ9H9P5 680 aaKnown RBP14.29□□□□□ -0.12
CPSF4-209ENST00000465132 SCPEP1Q9HB40 452 aa14.29□□□□□ -0.12
CPSF4-209ENST00000465132 C17orf98A8MV24 154 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 CLDN34H7C241 214 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 SULT1C2O00338 296 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 CTDSP2O14595 271 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 FCN3O75636 299 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 TAS2R20P59543 309 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 SPANXN2Q5MJ10 180 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 FOXB2Q5VYV0 432 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 HEPN1Q6WQI6 88 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 FGFRL1Q8N441 504 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 OR13D1Q8NGV5 346 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 OR4K15Q8NH41 348 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 SETD6Q8TBK2 473 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 MBNL3Q9NUK0 354 aaKnown RBP14.28□□□□□ -0.12
CPSF4-209ENST00000465132 CALYQ9NYX4 217 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 ZNF581Q9P0T4 197 aa14.28□□□□□ -0.12
CPSF4-209ENST00000465132 MRPS7Q9Y2R9 242 aaKnown RBP14.28□□□□□ -0.12
CPSF4-209ENST00000465132 TRRAPQ9Y4A5 3859 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 RGS11O94810 467 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 PTBP1P26599 531 aaKnown RBP eCLIP14.27□□□□□ -0.13
CPSF4-209ENST00000465132 ZNF273Q14593 569 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 PYHIN1Q6K0P9 492 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 LAX1Q8IWV1 398 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 OR52M1Q8NGK5 317 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 MRPL30Q8TCC3 161 aaKnown RBP14.27□□□□□ -0.13
CPSF4-209ENST00000465132 MRGPRDQ8TDS7 321 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 CCDC107Q8WV48 283 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 GALMQ96C23 342 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 PCGF1Q9BSM1 259 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 MS4A7Q9GZW8 240 aaPredicted RBP14.27□□□□□ -0.13
CPSF4-209ENST00000465132 LINC00574Q9H8X3 128 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 ZNF286AQ9HBT8 521 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 PTTG2Q9NZH5 202 aa14.27□□□□□ -0.13
CPSF4-209ENST00000465132 TMEM235A6NFC5 223 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 FABP12A6NFH5 140 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 DIRAS3O95661 229 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 IGHV4-38-2P0DP08 117 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 SLC9A3R2Q15599 337 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 GPR157Q5UAW9 335 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 STEAP3Q658P3 488 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 CNIH2Q6PI25 160 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 Q6ZS49 121 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 C9orf139Q6ZV77 190 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 RTN4RL2Q86UN3 420 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 OR13A1Q8NGR1 328 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 ARL11Q969Q4 196 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 UPRTQ96BW1 309 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 SIRPDQ9H106 197 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 IFT46Q9NQC8 304 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 SESN1Q9Y6P5 492 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 KIAA2026Q5HYC2 2103 aa14.26□□□□□ -0.13
CPSF4-209ENST00000465132 IGHV3OR16-10A0A075B7F0 116 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 TRDCB7Z8K6 153 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 LPLP06858 475 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 FCGR3AP08637 254 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 CTXN2P0C2S0 81 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 IGHV1-8P0DP01 117 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 HTD2P86397 168 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 IL18Q14116 193 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 CNPY1Q3B7I2 92 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 Q3ZCU0 254 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 ZNF880Q6PDB4 577 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 VMO1Q7Z5L0 202 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 FCAMRQ8WWV6 532 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 DYRK2Q92630 601 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 CREB3L1Q96BA8 519 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 OCSTAMPQ9BR26 566 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 TAF9BQ9HBM6 251 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 Q9N2K0 584 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 IDI2-AS1Q9NZ38 188 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 KCNK7Q9Y2U2 307 aa14.25□□□□□ -0.13
CPSF4-209ENST00000465132 SOX21Q9Y651 276 aaPredicted RBP14.25□□□□□ -0.13
CPSF4-209ENST00000465132 NPIPB11E5RHQ5 1161 aa14.24□□□□□ -0.13
CPSF4-209ENST00000465132 CGB3P0DN86 165 aa14.24□□□□□ -0.13
CPSF4-209ENST00000465132 CGB7P0DN87 165 aa14.24□□□□□ -0.13
CPSF4-209ENST00000465132 CCL3L1P16619 93 aa14.24□□□□□ -0.13
CPSF4-209ENST00000465132 TNFSF8P32971 234 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms