RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 IGHV1-3A0A0C4DH29 117 aa12.29□□□□□ -0.44
NUP50-213ENST00000461437 LINC01548A6NM66 108 aa12.29□□□□□ -0.44
NUP50-213ENST00000461437 ZNF736B4DX44 427 aaPredicted RBP12.29□□□□□ -0.44
NUP50-213ENST00000461437 CCRL2O00421 344 aa12.29□□□□□ -0.44
NUP50-213ENST00000461437 ZNF780AO75290 641 aaPredicted RBP12.29□□□□□ -0.44
NUP50-213ENST00000461437 CDK1P06493 297 aa12.29□□□□□ -0.44
NUP50-213ENST00000461437 PF4V1P10720 104 aa12.29□□□□□ -0.44
NUP50-213ENST00000461437 RCC1P18754 421 aaPredicted RBP12.29□□□□□ -0.44
NUP50-213ENST00000461437 AQP4P55087 323 aa12.29□□□□□ -0.44
NUP50-213ENST00000461437 GABPB1Q06547 395 aaPredicted RBP12.29□□□□□ -0.44
NUP50-213ENST00000461437 KPRPQ5T749 579 aaPredicted RBP12.29□□□□□ -0.44
NUP50-213ENST00000461437 OR10A7Q8NGE5 316 aa12.29□□□□□ -0.44
NUP50-213ENST00000461437 TRAPPC2LQ9UL33 140 aa12.29□□□□□ -0.44
NUP50-213ENST00000461437 MCRIP1C9JLW8 97 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 MPIG6BO95866 241 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 GZMHP20718 246 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 RAB7AP51149 207 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 ZNF134P52741 427 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 GPR176Q14439 515 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 GNMTQ14749 295 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 ACSM3Q53FZ2 586 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 NKAPLQ5M9Q1 402 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 THNSL2Q86YJ6 484 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 OR8H3Q8N146 312 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 PHF21AQ96BD5 680 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 Q96M66 194 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 ERGIC3Q9Y282 383 aa12.28□□□□□ -0.44
NUP50-213ENST00000461437 PSMB11A5LHX3 300 aa12.27□□□□□ -0.45
NUP50-213ENST00000461437 ORC5O43913 435 aa12.27□□□□□ -0.45
NUP50-213ENST00000461437 HBZP02008 142 aa12.27□□□□□ -0.45
NUP50-213ENST00000461437 CD33P20138 364 aa12.27□□□□□ -0.45
NUP50-213ENST00000461437 ZNF816Q0VGE8 651 aaPredicted RBP12.27□□□□□ -0.45
NUP50-213ENST00000461437 RBM48Q5RL73 367 aaKnown RBP12.27□□□□□ -0.45
NUP50-213ENST00000461437 C6orf141Q5SZD1 244 aa12.27□□□□□ -0.45
NUP50-213ENST00000461437 Q6ZPA2 131 aa12.27□□□□□ -0.45
NUP50-213ENST00000461437 LRRTM1Q86UE6 522 aa12.27□□□□□ -0.45
NUP50-213ENST00000461437 OR4X2Q8NGF9 303 aa12.27□□□□□ -0.45
NUP50-213ENST00000461437 EAF1Q96JC9 268 aaPredicted RBP12.27□□□□□ -0.45
NUP50-213ENST00000461437 PCDHB16Q9NRJ7 776 aa12.27□□□□□ -0.45
NUP50-213ENST00000461437 LSM2Q9Y333 95 aaKnown RBP12.27□□□□□ -0.45
NUP50-213ENST00000461437 TSSC4Q9Y5U2 329 aaPredicted RBP12.27□□□□□ -0.45
NUP50-213ENST00000461437 PF4P02776 101 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 GAPDHP04406 335 aaKnown RBP12.26□□□□□ -0.45
NUP50-213ENST00000461437 CD1AP06126 327 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 GPR50Q13585 617 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 MED22Q15528 200 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 CT45A1Q5HYN5 189 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 FOXB2Q5VYV0 432 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 UNQ9370/PRO34162Q6UXP9 181 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 SLC16A12Q6ZSM3 486 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 LINC00311Q8N616 119 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 ZNF439Q8NDP4 499 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 OR52L2PQ8NGH6 319 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 CT45A3Q8NHU0 189 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 RTN4IP1Q8WWV3 396 aaPredicted RBP12.26□□□□□ -0.45
NUP50-213ENST00000461437 ST6GALNAC6Q969X2 333 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 NICN1Q9BSH3 213 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 AURKAIP1Q9NWT8 199 aaPredicted RBP12.26□□□□□ -0.45
NUP50-213ENST00000461437 GNG12Q9UBI6 72 aa12.26□□□□□ -0.45
NUP50-213ENST00000461437 NCBP2LA6PVI3 153 aaKnown RBP12.25□□□□□ -0.45
NUP50-213ENST00000461437 SERPINE3A8MV23 424 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 M0QZK8 103 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 VSIG8P0DPA2 414 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 LCNL1Q6ZST4 164 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 CEACAM19Q7Z692 300 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 NKAIN3Q8N8D7 197 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 OR52M1Q8NGK5 317 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 MRPL30Q8TCC3 161 aaKnown RBP12.25□□□□□ -0.45
NUP50-213ENST00000461437 TMEM203Q969S6 136 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 MRPS24Q96EL2 167 aaKnown RBP12.25□□□□□ -0.45
NUP50-213ENST00000461437 SULT4A1Q9BR01 284 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 MND1Q9BWT6 205 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 VCXQ9H320 206 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 DCLRE1BQ9H816 532 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 TAF9BQ9HBM6 251 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 SPACA1Q9HBV2 294 aa12.25□□□□□ -0.45
NUP50-213ENST00000461437 SPINT2O43291 252 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 PDCD6O75340 191 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 FUT3P21217 361 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 MAPK3P27361 379 aaPredicted RBP12.24□□□□□ -0.45
NUP50-213ENST00000461437 PPP1CCP36873 323 aaKnown RBP12.24□□□□□ -0.45
NUP50-213ENST00000461437 RPS25P62851 125 aaKnown RBP12.24□□□□□ -0.45
NUP50-213ENST00000461437 UNC119Q13432 240 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 IRF3Q14653 427 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 SPHARQ15513 63 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 LIPKQ5VXJ0 399 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 ETV3LQ6ZN32 361 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 SLC25A48Q6ZT89 311 aaKnown RBP12.24□□□□□ -0.45
NUP50-213ENST00000461437 SLC35E3Q7Z769 313 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 CDH26Q8IXH8 852 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 GAPTQ8N292 157 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 Q8N6K4 173 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 Q8N9W7 124 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 MRAPQ8TCY5 172 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 DUX3Q96PT4 197 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 GFI1Q99684 422 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 FAAP24Q9BTP7 215 aa12.24□□□□□ -0.45
NUP50-213ENST00000461437 A0A0A6YYD4 124 aa12.23□□□□□ -0.45
NUP50-213ENST00000461437 H0YHG0 523 aa12.23□□□□□ -0.45
NUP50-213ENST00000461437 FGF16O43320 207 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms