RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TMEM210A6NLX4 147 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 CRYAAP02489 173 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 CAV2P51636 162 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 SRSF7Q16629 238 aaKnown RBP eCLIP9.93□□□□□ -0.82
VTA1-203ENST00000452973 CXorf66Q5JRM2 361 aaPredicted RBP9.93□□□□□ -0.82
VTA1-203ENST00000452973 SELENOHQ8IZQ5 122 aaKnown RBP9.93□□□□□ -0.82
VTA1-203ENST00000452973 FAM185AQ8N0U4 392 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 LRTM2Q8N967 370 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 STOML3Q8TAV4 291 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 CHD3Q12873 2000 aaKnown RBP9.93□□□□□ -0.82
VTA1-203ENST00000452973 PTPRQQ9UMZ3 2332 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 E5RGE8 158 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 APOC3P02656 99 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 FGF2P09038 288 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 OR3A1P47881 315 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 EDDM3AQ14507 147 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 LTC4SQ16873 150 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 H1FOOQ8IZA3 346 aaPredicted RBP9.93□□□□□ -0.82
VTA1-203ENST00000452973 OR10V1Q8NGI7 309 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 RFESDQ8TAC1 157 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 LRRC29Q8WV35 223 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 PLPPR2Q96GM1 343 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 HRH4Q9H3N8 390 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 BARX1Q9HBU1 254 aaPredicted RBP9.93□□□□□ -0.82
VTA1-203ENST00000452973 TREM2Q9NZC2 230 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 WASF3Q9UPY6 502 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 AMDHD2Q9Y303 409 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 NSG2Q9Y328 171 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 BSNQ9UPA5 3926 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 SHOXO15266 292 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 SPRY3O43610 288 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 SSSCA1O60232 199 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 SERPINE2P07093 398 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 PSG2P11465 335 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 S100GP29377 79 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 GNMTQ14749 295 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 SPACA3Q8IXA5 215 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 OR1L1Q8NH94 360 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 LILRB1Q8NHL6 650 aaPredicted RBP9.93□□□□□ -0.82
VTA1-203ENST00000452973 MRGPRDQ8TDS7 321 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 RNF141Q8WVD5 230 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 DNTTIP1Q9H147 329 aa9.93□□□□□ -0.82
VTA1-203ENST00000452973 A8MXK9 166 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 ATP6V1G2-DDX39BF2Z307 99 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 MDH2P40926 338 aaKnown RBP9.92□□□□□ -0.82
VTA1-203ENST00000452973 NKX2-1P43699 371 aaPredicted RBP9.92□□□□□ -0.82
VTA1-203ENST00000452973 SPRNQ5BIV9 151 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 ACP7Q6ZNF0 438 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 MED9Q9NWA0 146 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 KCNIP1Q9NZI2 227 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 GLS2Q9UI32 602 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 IGHV3OR15-7A0A075B7D8 119 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 AGPAT2O15120 278 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 KITLGP21583 273 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 ZP3P21754 424 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 F2RP25116 425 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 COL10A1Q03692 680 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 TESK1Q15569 626 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 ZNF880Q6PDB4 577 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 FAM57AQ8TBR7 257 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 IFT22Q9H7X7 185 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 PKDREJQ9NTG1 2253 aa9.92□□□□□ -0.82
VTA1-203ENST00000452973 TRBV6-6A0A0A6YYG2 114 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 IGHV3-43A0A0B4J1X8 118 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 FAM24AA6NFZ4 105 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 CDS2O95674 445 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 IGHV3-43DP0DP04 118 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 IL2RGP31785 369 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 GLIPR1P48060 266 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 SRPXP78539 464 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 PRR30Q53SZ7 412 aaPredicted RBP9.91□□□□□ -0.82
VTA1-203ENST00000452973 OR2B11Q5JQS5 317 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 TIMM23BQ5SRD1 257 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 HSD17B13Q7Z5P4 300 aaPredicted RBP9.91□□□□□ -0.82
VTA1-203ENST00000452973 DCTN5Q9BTE1 182 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 TMEM231Q9H6L2 316 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 ZDHHC8Q9ULC8 765 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 DEFB108AA8MXU0 73 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 MED6O75586 246 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 CLINT1Q14677 625 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 ZNF808Q8N4W9 903 aaPredicted RBP9.91□□□□□ -0.82
VTA1-203ENST00000452973 BPIFCQ8NFQ6 507 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 OR52L2PQ8NGH6 319 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 SUN5Q8TC36 379 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 MARVELD3Q96A59 401 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 TMEM56Q96MV1 263 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 RHOFQ9HBH0 211 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 TMEM56-RWDD3S4R434 201 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 MED19A0JLT2 244 aaPredicted RBP9.91□□□□□ -0.82
VTA1-203ENST00000452973 TMEM30CPA0ZSE6 113 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 PRRG2O14669 202 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 ID4P47928 161 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 DEFA5Q01523 94 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 KRTCAP3Q53RY4 240 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 FAM201AQ5SY85 155 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 MBNL2Q5VZF2 373 aaKnown RBP9.91□□□□□ -0.82
VTA1-203ENST00000452973 DOLPP1Q86YN1 238 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 HSD17B11Q8NBQ5 300 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 DMBX1Q8NFW5 382 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 OR4D5Q8NGN0 318 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms