RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 SH2D1BO14796 132 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 NUPL2O15504 423 aaKnown RBP11.96□□□□□ -0.5
NCLP1-201ENST00000445357 PITX3O75364 302 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 ID4P47928 161 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 RAB5CP51148 216 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 TESK1Q15569 626 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 FAM74A3Q4VXF1 159 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 FIP1L1Q6UN15 594 aaKnown RBP11.96□□□□□ -0.5
NCLP1-201ENST00000445357 COMMD1Q8N668 190 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 SLC25A31Q9H0C2 315 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 TLNRD1Q9H1K6 362 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 TMEM231Q9H6L2 316 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 PLEKHF2Q9H8W4 249 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 OBP2BQ9NPH6 170 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 OR1A1Q9P1Q5 309 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 PURGQ9UJV8 347 aaKnown RBP11.96□□□□□ -0.5
NCLP1-201ENST00000445357 FAM96BQ9Y3D0 163 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 FAM24AA6NFZ4 105 aa11.95□□□□□ -0.5
NCLP1-201ENST00000445357 RNASEK-C17orf49H0YIS7 233 aa11.95□□□□□ -0.5
NCLP1-201ENST00000445357 H0YL77 283 aa11.95□□□□□ -0.5
NCLP1-201ENST00000445357 MLNRO43193 412 aa11.95□□□□□ -0.5
NCLP1-201ENST00000445357 WDR1O75083 606 aa11.95□□□□□ -0.5
NCLP1-201ENST00000445357 IGLV1-44P01699 117 aa11.95□□□□□ -0.5
NCLP1-201ENST00000445357 IGLV2-14P01704 120 aa11.95□□□□□ -0.5
NCLP1-201ENST00000445357 ATF4P18848 351 aaPredicted RBP11.95□□□□□ -0.5
NCLP1-201ENST00000445357 KITLGP21583 273 aa11.95□□□□□ -0.5
NCLP1-201ENST00000445357 ZNF169Q14929 603 aaPredicted RBP11.95□□□□□ -0.5
NCLP1-201ENST00000445357 CXorf66Q5JRM2 361 aaPredicted RBP11.95□□□□□ -0.5
NCLP1-201ENST00000445357 LUZP4Q9P127 313 aa11.95□□□□□ -0.5
NCLP1-201ENST00000445357 TAAR3PQ9P1P4 343 aa11.95□□□□□ -0.5
NCLP1-201ENST00000445357 STRAPQ9Y3F4 350 aaKnown RBP11.95□□□□□ -0.5
NCLP1-201ENST00000445357 TNFSF12O43508 249 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 TNFSF13O75888 250 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 AGFG2O95081 481 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 LMO1P25800 156 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 FOXF2Q12947 444 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 C11orf53Q8IXP5 236 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 TMEM252Q8N6L7 170 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 IL1F10Q8WWZ1 152 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 TAAR6Q96RI8 345 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 CXXC4Q9H2H0 198 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 DKK4Q9UBT3 224 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 CACFD1Q9UGQ2 172 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 TINAGQ9UJW2 476 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 TRAPPC2LQ9UL33 140 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 SPTBN2O15020 2390 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 FAM157AC9JC47 383 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 SSSCA1O60232 199 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 SNAPINO95295 136 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 HAND1O96004 215 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 GRPP07492 148 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 OR8U9P0C7N5 309 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 CECR9P0C854 216 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 DVL1P1P54792 670 aaPredicted RBP11.94□□□□□ -0.5
NCLP1-201ENST00000445357 VAMP2P63027 116 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 BAXQ07812 192 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 ZNF266Q14584 549 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 OR8U1Q8NH10 309 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 BCL2L14Q9BZR8 327 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 RNF115Q9Y4L5 304 aa11.94□□□□□ -0.5
NCLP1-201ENST00000445357 GTF3C1Q12789 2109 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 TRAV39A0A0B4J263 110 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 A0A1B0GU03 582 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 MBD3L4A6NDZ8 208 aaPredicted RBP11.93□□□□□ -0.5
NCLP1-201ENST00000445357 MBD3L3A6NE82 208 aaPredicted RBP11.93□□□□□ -0.5
NCLP1-201ENST00000445357 MBD3L5A6NJ08 208 aaPredicted RBP11.93□□□□□ -0.5
NCLP1-201ENST00000445357 CGAP01215 116 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 HEXAP06865 529 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 EIF2S3P41091 472 aaKnown RBP11.93□□□□□ -0.5
NCLP1-201ENST00000445357 P2RY6Q15077 328 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 IGFL3Q6UXB1 125 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 CXorf67Q86X51 503 aaPredicted RBP11.93□□□□□ -0.5
NCLP1-201ENST00000445357 ODF3L1Q8IXM7 274 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 C1orf174Q8IYL3 243 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 FAM169BQ8N8A8 192 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 CLRN3Q8NCR9 226 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 MBD3L2Q8NHZ7 208 aaPredicted RBP11.93□□□□□ -0.5
NCLP1-201ENST00000445357 LSM10Q969L4 123 aaKnown RBP11.93□□□□□ -0.5
NCLP1-201ENST00000445357 MAGT1Q9H0U3 335 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 SH3BGRL3Q9H299 93 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 ZNF71Q9NQZ8 489 aaPredicted RBP11.93□□□□□ -0.5
NCLP1-201ENST00000445357 PROCRQ9UNN8 238 aa11.93□□□□□ -0.5
NCLP1-201ENST00000445357 A0A0G2JRQ6 117 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 A0A1B0GWJ7 208 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 TMEM30CPA0ZSE6 113 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 TMEM50AO95807 157 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 SERPINE2P07093 398 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 PSG2P11465 335 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 CAMLGP49069 296 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 ZADH2Q8N4Q0 377 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 HSD17B11Q8NBQ5 300 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 OR51H1Q8NH63 302 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 GPR146Q96CH1 333 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 STARD4Q96DR4 205 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 C19orf12Q9NSK7 152 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 CHD3Q12873 2000 aaKnown RBP11.92□□□□□ -0.5
NCLP1-201ENST00000445357 KIAA1324LA8MWY0 1029 aaPredicted RBP11.92□□□□□ -0.5
NCLP1-201ENST00000445357 K7N7A8 449 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 HSPA12AO43301 675 aa11.92□□□□□ -0.5
NCLP1-201ENST00000445357 TSPAN15O95858 294 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms