RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CUBNO60494 3623 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 FLNAP21333 2647 aaKnown RBP7.75□□□□□ -1.17
HDAC6-209ENST00000440653 CHD3Q12873 2000 aaKnown RBP7.74□□□□□ -1.17
HDAC6-209ENST00000440653 E5RGE8 158 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 K7EPK0 472 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 SH2D1BO14796 132 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 CGAP01215 116 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 CECR9P0C854 216 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 PAX5Q02548 391 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 ZNF154Q13106 437 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 RAB32Q13637 225 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 MSMO1Q15800 293 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 SMIM21Q3B7S5 101 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 ZNF718Q3SXZ3 478 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 TIMM23BQ5SRD1 257 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 SPATA46Q5T0L3 261 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 RGS7BPQ6MZT1 257 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-209ENST00000440653 ZNF585AQ6P3V2 769 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 TRAT1Q6PIZ9 186 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 UQCC3Q6UW78 93 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 Q6ZPA2 131 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 MYPOPQ86VE0 399 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-209ENST00000440653 CXorf67Q86X51 503 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-209ENST00000440653 LDLRAD3Q86YD5 345 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 FAM90A1Q86YD7 464 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 BAP18Q8IXM2 172 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 WDR31Q8NA23 367 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 SCCPDHQ8NBX0 429 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 OR1S1Q8NH92 325 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 KLF14Q8TD94 323 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-209ENST00000440653 MSI2Q96DH6 328 aaKnown RBP7.74□□□□□ -1.17
HDAC6-209ENST00000440653 C18orf12Q96KH6 178 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 OR10C1Q96KK4 312 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 TMEM56Q96MV1 263 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 TMEM222Q9H0R3 208 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 OR51B6Q9H340 312 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 LIME1Q9H400 295 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 TMEM100Q9NV29 134 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 ZNF581Q9P0T4 197 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 ZNF629Q9UEG4 869 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-209ENST00000440653 NSG2Q9Y328 171 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 TMEM56-RWDD3S4R434 201 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 ABCA4P78363 2273 aa7.74□□□□□ -1.17
HDAC6-209ENST00000440653 TRAV24A0A0B4J272 114 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 IGHV2OR16-5A0A0B4J2B6 119 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 C3orf85A0A1B0GTC6 90 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 TMEM30CPA0ZSE6 113 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 RNF212BA8MTL3 300 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 MPPED1O15442 326 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 PHF1O43189 567 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-209ENST00000440653 TIMM8AO60220 97 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-209ENST00000440653 LILRA1O75019 489 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 FGF2P09038 288 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 MMP9P14780 707 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 PVALBP20472 110 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-209ENST00000440653 UCP1P25874 307 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 PSG7Q13046 419 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 PHLDA2Q53GA4 152 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 Q6P435 159 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 ZNF497Q6ZNH5 498 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 WDR86Q86TI4 376 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 H1FOOQ8IZA3 346 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-209ENST00000440653 OR5D13Q8NGL4 314 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 OR10Z1Q8NGY1 313 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 OR10J5Q8NHC4 309 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 FAM57AQ8TBR7 257 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 NRGNQ92686 78 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 MRPL24Q96A35 216 aaKnown RBP7.73□□□□□ -1.17
HDAC6-209ENST00000440653 STARD4Q96DR4 205 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 C14orf79Q96F83 325 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 AKR1E2Q96JD6 320 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 SLC5A7Q9GZV3 580 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 PIGMQ9H3S5 423 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 SEBOXQ9HB31 216 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-209ENST00000440653 ZC4H2Q9NQZ6 224 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 LIN7CQ9NUP9 197 aaKnown RBP7.73□□□□□ -1.17
HDAC6-209ENST00000440653 TAAR3PQ9P1P4 343 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 IL36RNQ9UBH0 155 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 OR2W1Q9Y3N9 320 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 SLC25A15Q9Y619 301 aa7.73□□□□□ -1.17
HDAC6-209ENST00000440653 INTS1Q8N201 2190 aaKnown RBP7.72□□□□□ -1.17
HDAC6-209ENST00000440653 A8MXK9 166 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 H0YIZ8 118 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 TEX46H3BTG2 121 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 IFNL4K9M1U5 179 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 SLC33A1O00400 549 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-209ENST00000440653 BET1O15155 118 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 ST8SIA3O43173 380 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 JTBO76095 146 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 PTBP3O95758 552 aaKnown RBP7.72□□□□□ -1.17
HDAC6-209ENST00000440653 OR2H2O95918 312 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 HAND1O96004 215 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 SLC25A6P12236 298 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 CD200P41217 278 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 P2RY1P47900 373 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 HERPUD1Q15011 391 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 HMGN3Q15651 99 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 TSC22D1Q15714 1073 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 IGSF11Q5DX21 431 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 GPR157Q5UAW9 335 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms