RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 WNK2Q9Y3S1 2297 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 RNASEK-C17orf49H0YIS7 233 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 FABP1P07148 127 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 GUK1Q16774 197 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 KHDC1LQ5JSQ8 128 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 NECAP1Q8NC96 275 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 ITLN1Q8WWA0 313 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 R3HDM4Q96D70 268 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 TVP23CQ96ET8 276 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 CACFD1Q9UGQ2 172 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 PHF3Q92576 2039 aaKnown RBP10.6□□□□□ -0.71
TCOF1-205ENST00000439160 ZNF705FA8MVS1 300 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-205ENST00000439160 OR2C1O95371 312 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 OR2H2O95918 312 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 ZNF705DP0CH99 300 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-205ENST00000439160 ZNF705BP0CI00 300 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-205ENST00000439160 PSG2P11465 335 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 PHYHD1Q5SRE7 291 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 VWA1Q6PCB0 445 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 VOPP1Q96AW1 172 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 HIF1ANQ9NWT6 349 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 TP53BP1Q12888 1972 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-205ENST00000439160 LINC00862A6NCI5 91 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 TMEM14DPA8MWL7 114 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 EFNA2O43921 213 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 CTSSP25774 331 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 NPBWR1P48145 328 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 SLC25A53Q5H9E4 307 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 OR4S2Q8NH73 311 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 TMEM56Q96MV1 263 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 MRPL13Q9BYD1 178 aaKnown RBP10.6□□□□□ -0.71
TCOF1-205ENST00000439160 MYLKQ15746 1914 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 FAM157AC9JC47 383 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 UBE2G1P62253 170 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 CCL13Q99616 98 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 HES4Q9HCC6 221 aa10.6□□□□□ -0.71
TCOF1-205ENST00000439160 ZNF708P17019 499 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 RPL31P62899 125 aaKnown RBP10.59□□□□□ -0.71
TCOF1-205ENST00000439160 PJVKQ0ZLH3 352 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 HIST2H3AQ71DI3 136 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 ZNF552Q9H707 407 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-205ENST00000439160 GPR132Q9UNW8 380 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 LIPGQ9Y5X9 500 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 CREBBPQ92793 2442 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 FER1L5A0AVI2 2057 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 DHRS7CA6NNS2 312 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 G6PCP35575 357 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 OPRK1P41145 380 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 DYNLT3P51808 116 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 KIAA0141Q14154 515 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-205ENST00000439160 SSX2Q16385 188 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 TMEM41BQ5BJD5 291 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 FFAR4Q5NUL3 377 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 CLDN14O95500 239 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 HOXD4P09016 255 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-205ENST00000439160 NAT1P18440 290 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 TMPRSS3P57727 454 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 ZNF154Q13106 437 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 Q6ZT83 130 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 TMEM230Q96A57 120 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 Q96M66 194 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 F2RP25116 425 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 UNC119Q13432 240 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 RTP5Q14D33 572 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 LINC00596Q86U02 117 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 OR8G5Q8NG78 346 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 PATZ1Q9HBE1 687 aaKnown RBP10.59□□□□□ -0.71
TCOF1-205ENST00000439160 CADP27708 2225 aa10.59□□□□□ -0.71
TCOF1-205ENST00000439160 COX7A2P2O60397 106 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 CDS2O95674 445 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 COX5BP10606 129 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 OR52L2PQ8NGH6 319 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 UBTD1Q9HAC8 227 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 DLL3Q9NYJ7 618 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 PINLYPA6NC86 204 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 SFTA3P0C7M3 94 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 PRRX1P54821 245 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 EFNB1P98172 346 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 DEFA6Q01524 100 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 PHYHIPLQ96FC7 376 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 MISP3Q96FF7 219 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 GPR137Q96N19 417 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 NEURL1O76050 574 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 ABHD14BQ96IU4 210 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 LINC00470Q9BZP3 86 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 SLC25A22Q9H936 323 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 NPTNQ9Y639 398 aa10.58□□□□□ -0.72
TCOF1-205ENST00000439160 PPIAL4EA0A075B759 164 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 A0A0B4J293 547 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 CDRT15L2A8MXV6 281 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 PPIAL4DF5H284 164 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 SYNGR3O43761 229 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 GYPAP02724 150 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 FGF2P09038 288 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 PPIAL4FP0DN26 164 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 REG1BP48304 166 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 TIGITQ495A1 244 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 ABHD17AQ96GS6 310 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 NPDC1Q9NQX5 325 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-205ENST00000439160 PPIAL4AQ9Y536 164 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms