RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 OTOSQ8NHW6 89 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 SLC25A46Q96AG3 418 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 OR10C1Q96KK4 312 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 AUNIPQ9H7T9 357 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 PRDM7Q9NQW5 492 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 MYH7P12883 1935 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 RAB29O14966 203 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 SOX15O60248 233 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 CLDN14O95500 239 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 WNT1P04628 370 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 PMELP40967 661 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 GZMKP49863 264 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 CCL8P80075 99 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 MEIG1Q5JSS6 88 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 GTF3AQ92664 365 aaKnown RBP5.02□□□□□ -1.61
HERC4-206ENST00000427635 GPR137Q96N19 417 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 OR51M1Q9H341 326 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 TUBD1Q9UJT1 453 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 RGPD4Q7Z3J3 1758 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 KCNE1BA0A087WTH5 132 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 LOC102724200A0A096LPH7 203 aaPredicted RBP5.02□□□□□ -1.61
HERC4-206ENST00000427635 IGHV1-69-2A0A0G2JMI3 117 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 TCRBV3S1A0A5B6 114 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 OR2W5A6NFC9 320 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 PDCD6O75340 191 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 CRYGCP07315 174 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 CELA2BP08218 269 aaPredicted RBP5.02□□□□□ -1.61
HERC4-206ENST00000427635 COL8A1P27658 744 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 PSMB6P28072 239 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 APOBEC3AP31941 199 aaPredicted RBP5.02□□□□□ -1.61
HERC4-206ENST00000427635 CCKARP32238 428 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 VAMP3Q15836 100 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 LEMD1Q68G75 181 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 OR5A2Q8NGI9 324 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 LINC01560Q8TB33 94 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 NTNG2Q96CW9 530 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 NPFFR1Q9GZQ6 430 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 OR2A25A4D2G3 310 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 KIAA1324LA8MWY0 1029 aaPredicted RBP5.02□□□□□ -1.61
HERC4-206ENST00000427635 E9PQ18 207 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 TCF21O43680 179 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 LINC00614P0C842 121 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 SLC25A1P53007 311 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 SNRPNP63162 240 aaKnown RBP5.02□□□□□ -1.61
HERC4-206ENST00000427635 SAMD13Q5VXD3 122 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 NRARPQ7Z6K4 114 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 PRNTQ86SH4 94 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 NANOGP1Q8N7R0 232 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 RHOXF1Q8NHV9 184 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 MRGPRFQ96AM1 343 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 C10orf35Q96D05 121 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 MS4A10Q96PG2 267 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 SORT1Q99523 831 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 OR2H1Q9GZK4 316 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 NXF2Q9GZY0 626 aaKnown RBP5.02□□□□□ -1.61
HERC4-206ENST00000427635 MAP1BP46821 2468 aaKnown RBP5.02□□□□□ -1.61
HERC4-206ENST00000427635 TCHHQ07283 1943 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 PYCARD-AS1I3L0S3 204 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 RER1O15258 196 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 CTLA4P16410 223 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 PRDX2P32119 198 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 LTBRP36941 435 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 REG1BP48304 166 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 KIAA0141Q14154 515 aaPredicted RBP5.02□□□□□ -1.61
HERC4-206ENST00000427635 TMEM183BQ1AE95 376 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 FAM214BQ7L5A3 538 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 LAX1Q8IWV1 398 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 YIPF6Q96EC8 236 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 CCL13Q99616 98 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 SYT11Q9BT88 431 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 SSBP3Q9BWW4 388 aaPredicted RBP5.02□□□□□ -1.61
HERC4-206ENST00000427635 MAP1LC3CQ9BXW4 147 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 NKX6-2Q9C056 277 aaPredicted RBP5.02□□□□□ -1.61
HERC4-206ENST00000427635 BCL2L10Q9HD36 194 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 NAT8BQ9UHF3 227 aa5.02□□□□□ -1.61
HERC4-206ENST00000427635 A0A0G2JLM5 398 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 CDIPTO14735 213 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 OGG1O15527 345 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 SYNGR1O43759 233 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 RPL27AP46776 148 aaKnown RBP5.01□□□□□ -1.61
HERC4-206ENST00000427635 PPOXP50336 477 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 EMP1P54849 157 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 PRICKLE4Q2TBC4 344 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 ZNF429Q86V71 674 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 ZNF383Q8NA42 475 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 SMIM19Q96E16 107 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 GALNT14Q96FL9 552 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 PDFQ9HBH1 243 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 NPAP1Q9NZP6 1156 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 PLEKHB1Q9UF11 243 aaPredicted RBP5.01□□□□□ -1.61
HERC4-206ENST00000427635 TMEM8BA6NDV4 472 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 H3BP45 60 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 MFNGO00587 321 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 ETHE1O95571 254 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 COX6CP09669 75 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 SPINK2P20155 84 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 CMC4P56277 68 aaPredicted RBP5.01□□□□□ -1.61
HERC4-206ENST00000427635 LIAT1Q6ZQX7 453 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 OR52I2Q8NH67 350 aa5.01□□□□□ -1.61
HERC4-206ENST00000427635 VSTM2LQ96N03 204 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms