RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 RAB3DO95716 219 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 AMY2AP04746 511 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 FXYD4P59646 89 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 BAMBIQ13145 260 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 KLRD1Q13241 179 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 OR51S1Q8NGJ8 323 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 SPNP16150 400 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 DTYMKP23919 212 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 ARL6IP1Q15041 203 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 ZNF880Q6PDB4 577 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 LDLRAD3Q86YD5 345 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 PNKDQ8N490 385 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 POC5Q8NA72 575 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 OR5H2Q8NGV7 314 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 CCDC32Q9BV29 185 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 OR2S2Q9NQN1 319 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 hADV38S2A0JD32 116 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 HSPA12AO43301 675 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 GLAP06280 429 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 PI3P19957 117 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 PTBP1P26599 531 aaKnown RBP eCLIP11.04□□□□□ -0.643e-11■■■■■ 42.1
PRPF39-202ENST00000424478 RCVRNP35243 200 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 OR3A3P47888 321 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 ACTBP60709 375 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 ACTG1P63261 375 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 TMEM17Q86X19 198 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 C11orf42Q8N5U0 333 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 OR5AP2Q8NGF4 316 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 ZNF714Q96N38 554 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 SMR3AQ99954 134 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 PCGF1Q9BSM1 259 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 KCNIP1Q9NZI2 227 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 RNF150Q9ULK6 438 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 SULT1C2O00338 296 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 SLC31A2O15432 143 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 COX7A1P24310 79 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 MRPS10P82664 201 aaKnown RBP11.04□□□□□ -0.64
PRPF39-202ENST00000424478 RNASE10Q5GAN6 216 aaKnown RBP11.04□□□□□ -0.64
PRPF39-202ENST00000424478 MSI2Q96DH6 328 aaKnown RBP11.04□□□□□ -0.64
PRPF39-202ENST00000424478 POM121Q96HA1 1249 aa11.04□□□□□ -0.64
PRPF39-202ENST00000424478 ZNF728P0DKX0 622 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 OR5H8P0DN80 308 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 KCNJ3P48549 501 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 RAB25P57735 213 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 TSPAN5P62079 268 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 DCTN2Q13561 401 aaKnown RBP11.03□□□□□ -0.64
PRPF39-202ENST00000424478 HMGN3Q15651 99 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 RAB39BQ96DA2 213 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 SUCNR1Q9BXA5 334 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 BEX2Q9BXY8 128 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 BEX1Q9HBH7 125 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 OR6C3Q9NZP0 311 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 KBTBD11-OT1A0A1B0GTJ5 212 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 FSTL3O95633 263 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 CGB3P0DN86 165 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 CGB7P0DN87 165 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 SLC25A16P16260 332 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 ERP29P30040 261 aaKnown RBP11.03□□□□□ -0.64
PRPF39-202ENST00000424478 FCGR2CP31995 323 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 BTCP35070 178 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 CEACAM6P40199 344 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 DSCR9P59020 149 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 Q8N7P7 452 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 C15orf40Q8WUR7 153 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 TOMM40LQ969M1 308 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 GINS4Q9BRT9 223 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 SEBOXQ9HB31 216 aaPredicted RBP11.03□□□□□ -0.64
PRPF39-202ENST00000424478 GNG12Q9UBI6 72 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 ANAPC10Q9UM13 185 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 LINC00312Q9Y6C7 94 aa11.03□□□□□ -0.64
PRPF39-202ENST00000424478 CA11O75493 328 aa11.02□□□□□ -0.64
PRPF39-202ENST00000424478 CSF1P09603 554 aa11.02□□□□□ -0.64
PRPF39-202ENST00000424478 NPY4RP50391 375 aa11.02□□□□□ -0.64
PRPF39-202ENST00000424478 LINC00205P59089 165 aa11.02□□□□□ -0.64
PRPF39-202ENST00000424478 TAS2R19P59542 299 aa11.02□□□□□ -0.64
PRPF39-202ENST00000424478 NRARPQ7Z6K4 114 aa11.02□□□□□ -0.64
PRPF39-202ENST00000424478 MRGPRFQ96AM1 343 aa11.02□□□□□ -0.64
PRPF39-202ENST00000424478 ZNF2Q9BSG1 426 aaPredicted RBP11.02□□□□□ -0.64
PRPF39-202ENST00000424478 FLVCR2Q9UPI3 526 aa11.02□□□□□ -0.64
PRPF39-202ENST00000424478 IGKV1D-13A0A0B4J2D9 117 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 H3BUI4 141 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 LYRM1O43325 122 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 ZNF735P0CB33 412 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 AKAIN1P0CW23 69 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 IGKV1-13P0DP09 117 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 ZNF134P52741 427 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 DLX6P56179 175 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 FAHD2BQ6P2I3 314 aaPredicted RBP11.02□□□□□ -0.65
PRPF39-202ENST00000424478 TMEM229BQ8NBD8 167 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 GALMQ96C23 342 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 FAHD2AQ96GK7 314 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 ST8SIA5O15466 376 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 TGFAP01135 160 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 NAT1P18440 290 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 AADACP22760 399 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 CBX5P45973 191 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 PAX2Q02962 417 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 CDK10Q15131 360 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 TMEM249Q2WGJ8 235 aa11.02□□□□□ -0.65
PRPF39-202ENST00000424478 OVCH2Q7RTZ1 564 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms