RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 NTN3O00634 580 aaPredicted RBP13.07□□□□□ -0.32
SHISA9-201ENST00000423335 CHRNA7P36544 502 aa13.07□□□□□ -0.32
SHISA9-201ENST00000423335 CEACAM6P40199 344 aa13.07□□□□□ -0.32
SHISA9-201ENST00000423335 NFAM1Q8NET5 270 aaPredicted RBP13.07□□□□□ -0.32
SHISA9-201ENST00000423335 TMEM68Q96MH6 324 aa13.07□□□□□ -0.32
SHISA9-201ENST00000423335 MAP1LC3BQ9GZQ8 125 aa13.07□□□□□ -0.32
SHISA9-201ENST00000423335 SH2D1BO14796 132 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 FCGR3AP08637 254 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 H3F3AP84243 136 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 OIT3Q8WWZ8 545 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 NTNG2Q96CW9 530 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 CHRNA10Q9GZZ6 450 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 TINAGQ9UJW2 476 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 HSF4Q9ULV5 492 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 PCDH15Q96QU1 1955 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 NAT2P11245 290 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 FGF7P21781 194 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 TMEM50BP56557 158 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 ERVS71-1P61550 626 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 PLGLAQ15195 96 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 CYB561D1Q8N8Q1 229 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 OR52M1Q8NGK5 317 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 HIPK2Q9H2X6 1198 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 OR51I2Q9H344 312 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 PARD6AQ9NPB6 346 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 STARD10Q9Y365 291 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 IGHV3-43A0A0B4J1X8 118 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 PRR19A6NJB7 356 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 TRAF3IP2O43734 574 aaPredicted RBP13.06□□□□□ -0.32
SHISA9-201ENST00000423335 IGHV3-43DP0DP04 118 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 HLA-DRB3P79483 266 aa13.06□□□□□ -0.32
SHISA9-201ENST00000423335 LIN7CQ9NUP9 197 aaKnown RBP13.06□□□□□ -0.32
SHISA9-201ENST00000423335 SPINT2O43291 252 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 SPINK4O60575 86 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 VDAC1P21796 283 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 FAM58AQ8N1B3 248 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 UHRF2Q96PU4 802 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 RARRES2Q99969 163 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 OPN3Q9H1Y3 402 aaPredicted RBP13.05□□□□□ -0.32
SHISA9-201ENST00000423335 POLDIP2Q9Y2S7 368 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 OR8U8P0C7N1 319 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 MMP9P14780 707 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 RPS2P15880 293 aaKnown RBP13.05□□□□□ -0.32
SHISA9-201ENST00000423335 ZNF708P17019 499 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 BCL3P20749 454 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 P2RY1P47900 373 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 RPP30P78346 268 aaKnown RBP13.05□□□□□ -0.32
SHISA9-201ENST00000423335 ZP4Q12836 540 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 RTN4RL2Q86UN3 420 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 CCL17Q92583 94 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 MRGPRFQ96AM1 343 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 TLN2Q9Y4G6 2542 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 H0YL77 283 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 HEXAP06865 529 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 SEC11BP0C7V7 166 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 CD82P27701 267 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 GNG3P63215 75 aa13.05□□□□□ -0.32
SHISA9-201ENST00000423335 BTBD17A6NE02 478 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 DEDDO75618 318 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 FBP1P09467 338 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 SLC25A6P12236 298 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 COX5AP20674 150 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 SUCLG1P53597 346 aaKnown RBP13.04□□□□□ -0.32
SHISA9-201ENST00000423335 ZNF92Q03936 586 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 COL19A1Q14993 1142 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 ZNF837Q96EG3 531 aaPredicted RBP13.04□□□□□ -0.32
SHISA9-201ENST00000423335 ABHD17AQ96GS6 310 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 ACTR3CQ9C0K3 210 aaPredicted RBP13.04□□□□□ -0.32
SHISA9-201ENST00000423335 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 H0YIZ8 118 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 ENSAO43768 121 aaKnown RBP13.04□□□□□ -0.32
SHISA9-201ENST00000423335 AQP10Q96PS8 301 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 POMT1Q9Y6A1 747 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 TRIOO75962 3097 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 PLAURQ03405 335 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 ENDOGQ14249 297 aaKnown RBP13.04□□□□□ -0.32
SHISA9-201ENST00000423335 HFEQ30201 348 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 RSG1Q9BU20 258 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 CCL21O00585 134 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 ZNF90Q03938 601 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 SLC38A11Q08AI6 406 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 LRP11Q86VZ4 500 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 ADAMTS17Q8TE56 1095 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 ZNF552Q9H707 407 aaPredicted RBP13.04□□□□□ -0.32
SHISA9-201ENST00000423335 DEPPQ9NTK1 212 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 SLC2A8Q9NY64 477 aa13.04□□□□□ -0.32
SHISA9-201ENST00000423335 FASNP49327 2511 aaKnown RBP13.03□□□□□ -0.32
SHISA9-201ENST00000423335 SCTP09683 121 aa13.03□□□□□ -0.32
SHISA9-201ENST00000423335 TMEM252Q8N6L7 170 aa13.03□□□□□ -0.32
SHISA9-201ENST00000423335 FAM103A1Q9BTL3 118 aaKnown RBP13.03□□□□□ -0.32
SHISA9-201ENST00000423335 NGFP01138 241 aa13.03□□□□□ -0.32
SHISA9-201ENST00000423335 SMIM6P0DI80 62 aa13.03□□□□□ -0.32
SHISA9-201ENST00000423335 TMEM38BQ9NVV0 291 aa13.03□□□□□ -0.32
SHISA9-201ENST00000423335 ZNF391Q9UJN7 358 aa13.03□□□□□ -0.32
SHISA9-201ENST00000423335 ZNF737O75373 536 aa13.03□□□□□ -0.32
SHISA9-201ENST00000423335 NTF3P20783 257 aa13.03□□□□□ -0.32
SHISA9-201ENST00000423335 FBXW9Q5XUX1 488 aa13.03□□□□□ -0.32
SHISA9-201ENST00000423335 NUFIP2Q7Z417 695 aaKnown RBP13.03□□□□□ -0.32
SHISA9-201ENST00000423335 RNF144BQ7Z419 303 aa13.03□□□□□ -0.32
SHISA9-201ENST00000423335 MDP1Q86V88 176 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms