RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 FAM90A18PA6NE21 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM90A16PA6NEW6 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM90A20PA6NIJ5 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM90A8PA6NJQ4 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM90A7PA6NKC0 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM74A7A6NL05 159 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM90A22PA8MWA6 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM90A12PA8MX19 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM90A5PA8MXJ8 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM90A23PA8MXZ1 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 K7EM74 188 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 JTBO76095 146 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM90A15PP0C7V4 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM90A13PP0C7W8 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM90A14PP0C7W9 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM90A24PP0C7X0 464 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 CECR9P0C854 216 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM157CP0CG43 387 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 PSG2P11465 335 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 GCH1P30793 250 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 CD80P33681 288 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 CEACAM6P40199 344 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 AESQ08117 197 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 FAM74A3Q4VXF1 159 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 ZGRF1Q86YA3 2104 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 ZNF808Q8N4W9 903 aaPredicted RBP9.28□□□□□ -0.92
DDX56-203ENST00000421223 WFDC1Q9HC57 220 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 GP6Q9HCN6 339 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 PLSCR2Q9NRY7 297 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 RCC2Q9P258 522 aaKnown RBP9.28□□□□□ -0.92
DDX56-203ENST00000421223 PROCRQ9UNN8 238 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 POLDIP2Q9Y2S7 368 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 TMED3Q9Y3Q3 217 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 TPRP12270 2363 aaKnown RBP9.28□□□□□ -0.92
DDX56-203ENST00000421223 SH2D1BO14796 132 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 PGLYRP1O75594 196 aaPredicted RBP9.28□□□□□ -0.92
DDX56-203ENST00000421223 IGHV3-13P01766 116 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 IGHV3-7P01780 117 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 S100GP29377 79 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 GABRA2P47869 451 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 UCP3P55916 312 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 EDDM3AQ14507 147 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 CLEC2AQ6UVW9 174 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 BEND4Q6ZU67 534 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 LDLRAD3Q86YD5 345 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 SELENOHQ8IZQ5 122 aaKnown RBP9.28□□□□□ -0.92
DDX56-203ENST00000421223 Q8NFD4 153 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 PLEKHA2Q9HB19 425 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 RHOFQ9HBH0 211 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 OR2W1Q9Y3N9 320 aa9.28□□□□□ -0.92
DDX56-203ENST00000421223 BORCS7-ASMTA0A0B4J1R7 106 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 TMEM218A2RU14 115 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 LRP5LA4QPB2 252 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 IGHG3P01860 377 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.93
DDX56-203ENST00000421223 HLA-DRB3P79483 266 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 INO80CQ6PI98 192 aaPredicted RBP9.27□□□□□ -0.93
DDX56-203ENST00000421223 PCSK4Q6UW60 755 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 OR4A4PQ8NGN8 299 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 NKX6-2Q9C056 277 aaPredicted RBP9.27□□□□□ -0.93
DDX56-203ENST00000421223 PLA2G2EQ9NZK7 142 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 ZDHHC8Q9ULC8 765 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 IGHV3-43A0A0B4J1X8 118 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 ZNF891A8MT65 544 aaPredicted RBP9.27□□□□□ -0.93
DDX56-203ENST00000421223 DEFB108AA8MXU0 73 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 PRR33A8MZF0 331 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 M0R1B8 84 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 TAAR5O14804 337 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 ATG12O94817 140 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 CTXN2P0C2S0 81 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 IGHV3-43DP0DP04 118 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 PVALBP20472 110 aaPredicted RBP9.27□□□□□ -0.93
DDX56-203ENST00000421223 PMELP40967 661 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 CAMLGP49069 296 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 ACSF3Q4G176 576 aaPredicted RBP9.27□□□□□ -0.93
DDX56-203ENST00000421223 OR2Z1Q8NG97 314 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 TLNRD1Q9H1K6 362 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 GLRX2Q9NS18 164 aa9.27□□□□□ -0.93
DDX56-203ENST00000421223 USF3Q68DE3 2245 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 MLNRO43193 412 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 PSPNO60542 156 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 HAND1O96004 215 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 ADCYAP1P18509 176 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 OR3A1P47881 315 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 Q6P435 159 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 TMEM182Q6ZP80 229 aaPredicted RBP9.26□□□□□ -0.93
DDX56-203ENST00000421223 OR2C3Q8N628 320 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 WDR31Q8NA23 367 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 PKIBQ9C010 78 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 TREM2Q9NZC2 230 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 PURGQ9UJV8 347 aaKnown RBP9.26□□□□□ -0.93
DDX56-203ENST00000421223 AQP7O14520 342 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 TM4SF5O14894 197 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 CHST1O43916 411 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 GPR137BO60478 399 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 TSPAN15O95858 294 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 CBR1P16152 277 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 IL2RGP31785 369 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 CEBPGP53567 150 aa9.26□□□□□ -0.93
DDX56-203ENST00000421223 TCF15Q12870 199 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms