RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 GABARAPL3Q9BY60 117 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 RASL12Q9NYN1 266 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 CHST1O43916 411 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 SELENOPP49908 381 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 KLRB1Q12918 225 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 OR52M1Q8NGK5 317 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 OR13C6PQ8NH95 151 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 ADTRPQ96IZ2 230 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 MRPL13Q9BYD1 178 aaKnown RBP9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 OPN3Q9H1Y3 402 aaPredicted RBP9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 HMX2A2RU54 273 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 RSPO4Q2I0M5 234 aaPredicted RBP9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 FAM74A4Q5TZK3 123 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 GPR27Q9NS67 375 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 TECRQ9NZ01 308 aaKnown RBP9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 SHANK3Q9BYB0 1731 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 PRR19A6NJB7 356 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 NPIPB6E9PJ23 425 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 CD81P60033 236 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 KRTCAP3Q53RY4 240 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 ASB10Q8WXI3 467 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 TMEM78Q5T7P6 136 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 LIAT1Q6ZQX7 453 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 RAX2Q96IS3 184 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 TMED3Q9Y3Q3 217 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 C2orf16Q68DN1 1984 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 WNT3P56703 355 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 GCSAMLQ5JQS6 135 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 NUDT10Q8NFP7 164 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 OR8B12Q8NGG6 310 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 NUDT11Q96G61 164 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 CISD1Q9NZ45 108 aaKnown RBP9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 STAG3L2P0CL84 134 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 CXorf66Q5JRM2 361 aaPredicted RBP9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 WDR25Q64LD2 544 aaPredicted RBP9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 ZNF714Q96N38 554 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 HIGD1AQ9Y241 93 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 UBR3Q6ZT12 1888 aa9.88□□□□□ -0.83
PRPF40A-202ENST00000410080 PSMB11A5LHX3 300 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 FBLL1A6NHQ2 334 aaKnown RBP9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 NPFFO15130 113 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 WDR38Q5JTN6 314 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 WDR74Q6RFH5 385 aaPredicted RBP9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 POM121Q96HA1 1249 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 THY1P04216 161 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 ZNF735P0CB33 412 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 RPL24P83731 157 aaKnown RBP9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 DMRTA2Q96SC8 542 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 CA10Q9NS85 328 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 ZAR1LA6NP61 321 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 FTH1P19P0C7X4 201 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 PMELP40967 661 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 STARD6P59095 220 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 SF3B6Q9Y3B4 125 aaKnown RBP9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 A0A1W2PS18 150 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 MAP1LC3B2A6NCE7 125 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 SRSF10O75494 262 aaKnown RBP9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 OVCH2Q7RTZ1 564 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 LINC00615Q96LM1 132 aaPredicted RBP9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 MAP1LC3BQ9GZQ8 125 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 TMEM167BQ9NRX6 74 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 LPAR3Q9UBY5 353 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 UBE2DNLQ8IWF7 75 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 CNRIP1Q96F85 164 aaPredicted RBP9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 RECKO95980 971 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 BTG1P62324 171 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 YBX1P67809 324 aaKnown RBP9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 ZNF56Q15929 161 aa9.87□□□□□ -0.83
PRPF40A-202ENST00000410080 PPIAL4EA0A075B759 164 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 PPIAL4DF5H284 164 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 PPIAL4FP0DN26 164 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 HINT1P49773 126 aaPredicted RBP9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 DLX6P56179 175 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 MDP1Q86V88 176 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 MANBALQ9NQG1 85 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 METTL1Q9UBP6 276 aaKnown RBP9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 ZNF256Q9Y2P7 627 aaPredicted RBP9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 PPIAL4AQ9Y536 164 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 ZNHIT1O43257 154 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 DXOO77932 396 aaKnown RBP9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 IGHV4-34P06331 123 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 VSIG10L2P0DP72 767 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 HIST1H1DP16402 221 aaKnown RBP9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 SLC6A1P30531 599 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 RAC3P60763 192 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 MEIG1Q5JSS6 88 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 AMER3Q8N944 861 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 NRTNQ99748 197 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 A0A1B0GTL3 188 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 PIGYQ3MUY2 71 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 C11orf87Q6NUJ2 197 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 ITLN2Q8WWU7 325 aaPredicted RBP9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 ABHD14BQ96IU4 210 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 GPA33Q99795 319 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 PCED1AQ9H1Q7 454 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 K7N7A8 449 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 PRR13Q9NZ81 148 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 C11orf94C9JXX5 98 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 CSF2RBP32927 897 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms