RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 ANKRD20A5PA0PJZ0 165 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 RFPL4AA6NLU0 287 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 MCRIP1C9JLW8 97 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 RFPL4AL1F8VTS6 287 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 NDUFB7P17568 137 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 PRTN3P24158 256 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 RCVRNP35243 200 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 FAUP35544 74 aaKnown RBP13.54□□□□□ -0.24
CGREF1-205ENST00000404694 KCNJ3P48549 501 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 MRPS15P82914 257 aaKnown RBP13.54□□□□□ -0.24
CGREF1-205ENST00000404694 NKAPLQ5M9Q1 402 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 Q6P435 159 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 PLET1Q6UQ28 207 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 C6orf201Q7Z4U5 140 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 VMO1Q7Z5L0 202 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 CD177Q8N6Q3 437 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 KIR3DL3Q8N743 410 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 TMEM185AQ8NFB2 350 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 LHX4Q969G2 390 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 CHST6Q9GZX3 395 aa13.54□□□□□ -0.24
CGREF1-205ENST00000404694 RIMS4Q9H426 269 aaPredicted RBP13.54□□□□□ -0.24
CGREF1-205ENST00000404694 ZMAT3Q9HA38 289 aaKnown RBP13.54□□□□□ -0.24
CGREF1-205ENST00000404694 hCG_2014768A0A024R1R8 64 aa13.53□□□□□ -0.24
CGREF1-205ENST00000404694 MEIOCA2RUB1 952 aa13.53□□□□□ -0.24
CGREF1-205ENST00000404694 TBPP20226 339 aa13.53□□□□□ -0.24
CGREF1-205ENST00000404694 DTYMKP23919 212 aa13.53□□□□□ -0.24
CGREF1-205ENST00000404694 SLC6A1P30531 599 aa13.53□□□□□ -0.24
CGREF1-205ENST00000404694 CEBPDP49716 269 aaPredicted RBP13.53□□□□□ -0.24
CGREF1-205ENST00000404694 DEFB112Q30KQ8 113 aa13.53□□□□□ -0.24
CGREF1-205ENST00000404694 RNASE12Q5GAN4 147 aaKnown RBP13.53□□□□□ -0.24
CGREF1-205ENST00000404694 ATAD3CQ5T2N8 411 aa13.53□□□□□ -0.24
CGREF1-205ENST00000404694 KLK11Q9UBX7 282 aa13.53□□□□□ -0.24
CGREF1-205ENST00000404694 ANAPC10Q9UM13 185 aa13.53□□□□□ -0.24
CGREF1-205ENST00000404694 IGHV1-69DA0A0B4J2H0 117 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 TMEM89A2RUT3 159 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 HAND1O96004 215 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 IGHV1-69P01742 117 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 PTHLHP12272 177 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 ZNF44P15621 663 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 SPNP16150 400 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 NAT1P18440 290 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 PRDX2P32119 198 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 BCAP31P51572 246 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 SRSF7Q16629 238 aaKnown RBP eCLIP13.52□□□□□ -0.25
CGREF1-205ENST00000404694 OLFML2AQ68BL7 652 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 TRAPPC6BQ86SZ2 158 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 ZNF561Q8N587 486 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 Q8N7P7 452 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 TMEM229BQ8NBD8 167 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 GCDHQ92947 438 aaPredicted RBP13.52□□□□□ -0.25
CGREF1-205ENST00000404694 CMSS1Q9BQ75 279 aaKnown RBP13.52□□□□□ -0.25
CGREF1-205ENST00000404694 FAAP24Q9BTP7 215 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 DPAGT1Q9H3H5 408 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 PRDM13Q9H4Q3 707 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 IFT46Q9NQC8 304 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 SIRT7Q9NRC8 400 aa13.52□□□□□ -0.25
CGREF1-205ENST00000404694 FUOMA2VDF0 154 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 CLDN34H7C241 214 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 OR2H2O95918 312 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 RNASE1P07998 156 aaKnown RBP13.51□□□□□ -0.25
CGREF1-205ENST00000404694 COMPP49747 757 aaPredicted RBP13.51□□□□□ -0.25
CGREF1-205ENST00000404694 SNU13P55769 128 aaKnown RBP13.51□□□□□ -0.25
CGREF1-205ENST00000404694 TAS2R19P59542 299 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 GUCA2AQ02747 115 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 SLC9A3R2Q15599 337 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 PDZD9Q8IXQ8 264 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 SUMF2Q8NBJ7 301 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 PPP1R35Q8TAP8 253 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 PPP1R14BQ96C90 147 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 SULT4A1Q9BR01 284 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 DPCDQ9BVM2 203 aaPredicted RBP13.51□□□□□ -0.25
CGREF1-205ENST00000404694 C12orf4Q9NQ89 552 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 IL36RNQ9UBH0 155 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 OR14J1Q9UGF5 321 aa13.51□□□□□ -0.25
CGREF1-205ENST00000404694 TRBV23-1A0A0A0MS06 115 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 TRBV6-6A0A0A6YYG2 114 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 TRAV24A0A0B4J272 114 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 SLC33A1O00400 549 aaPredicted RBP13.5□□□□□ -0.25
CGREF1-205ENST00000404694 HOXA3O43365 443 aaPredicted RBP13.5□□□□□ -0.25
CGREF1-205ENST00000404694 SSX5O60225 188 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 PFDN1O60925 122 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 DUSP1P28562 367 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 PAX5Q02548 391 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 PLA1AQ53H76 456 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 ACTBL2Q562R1 376 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 C12orf54Q6X4T0 127 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 NUDCD2Q8WVJ2 157 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 ZDHHC16Q969W1 377 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 CREB3L1Q96BA8 519 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 HRASLSQ9HDD0 168 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 AK3Q9UIJ7 227 aa13.5□□□□□ -0.25
CGREF1-205ENST00000404694 M0R1W7 72 aa13.49□□□□□ -0.25
CGREF1-205ENST00000404694 CSN2P05814 226 aa13.49□□□□□ -0.25
CGREF1-205ENST00000404694 AKAIN1P0CW23 69 aa13.49□□□□□ -0.25
CGREF1-205ENST00000404694 DLX1P56177 255 aa13.49□□□□□ -0.25
CGREF1-205ENST00000404694 PAN3Q58A45 887 aaKnown RBP13.49□□□□□ -0.25
CGREF1-205ENST00000404694 Q6ZS49 121 aa13.49□□□□□ -0.25
CGREF1-205ENST00000404694 C1orf122Q6ZSJ8 110 aa13.49□□□□□ -0.25
CGREF1-205ENST00000404694 HOGA1Q86XE5 327 aa13.49□□□□□ -0.25
CGREF1-205ENST00000404694 FAM185AQ8N0U4 392 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms