RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ZNF735P0CB33 412 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 HLA-GP17693 338 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 ZXDAP98168 799 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 IL11RAQ14626 422 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 GAPTQ8N292 157 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 KLRC4-KLRK1H3BQV0 150 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 DXOO77932 396 aaKnown RBP12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 HEPN1Q6WQI6 88 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 UBALD2Q8IYN6 164 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 OR1F12Q8NHA8 337 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 OPN3Q9H1Y3 402 aaPredicted RBP12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 DUSP13Q9UII6 198 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 UNC119Q13432 240 aa12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 SPATA46Q5T0L3 261 aa12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 TMPRSS7Q7RTY8 843 aa12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 OR5B3Q8NH48 314 aa12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 FLVCR1-AS1Q8TAF5 88 aa12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 GTF3AQ92664 365 aaKnown RBP12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 FER1L6-AS2Q96M78 137 aa12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 FREM3P0C091 2139 aa12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 C11orf94C9JXX5 98 aa12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 GYPAP02724 150 aa12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 CCL2P13500 99 aa12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 FUT6P51993 359 aa12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 ZNF816Q0VGE8 651 aaPredicted RBP12.71□□□□□ -0.37
RPRD1A-202ENST00000399022 PRAMEF5Q5TYX0 476 aa12.71□□□□□ -0.38
RPRD1A-202ENST00000399022 PRAMEF6Q5VXH4 476 aa12.71□□□□□ -0.38
RPRD1A-202ENST00000399022 OR6X1Q8NH79 312 aa12.71□□□□□ -0.38
RPRD1A-202ENST00000399022 SGMS2Q8NHU3 365 aa12.71□□□□□ -0.38
RPRD1A-202ENST00000399022 SOX7Q9BT81 388 aa12.71□□□□□ -0.38
RPRD1A-202ENST00000399022 TRDCB7Z8K6 153 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 CRYAAP02489 173 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 MELTFP08582 738 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 CCL28Q9NRJ3 127 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 CYTL1Q9NRR1 136 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 ANAPC1Q9H1A4 1944 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 SIRPB1O00241 398 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 HRASP01112 189 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 ARL3P36405 182 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 CDC34P49427 236 aaPredicted RBP12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 OIT3Q8WWZ8 545 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 ACY3Q96HD9 319 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 IGLV1-36A0A0B4J1U3 117 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 CRYM-AS1A6NIL9 109 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 OR7C2O60412 319 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 SRP19P09132 144 aaKnown RBP12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 GNG10P50151 68 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 TMEM50BP56557 158 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 FOXK1P85037 733 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 OR10G8Q8NGN5 311 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 GPHA2Q96T91 129 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 KCNIP2Q9NS61 270 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 STARD10Q9Y365 291 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 IGHV2-70P01814 119 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 OR10D3Q8NH80 312 aa12.7□□□□□ -0.38
RPRD1A-202ENST00000399022 DNAH12Q6ZR08 3092 aa12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 DIRC3C9JPN6 131 aa12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 RRP8O43159 456 aaKnown RBP12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 SUCLG1P53597 346 aaKnown RBP12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 VOPP1Q96AW1 172 aa12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 ZNF385AQ96PM9 386 aaKnown RBP12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 SLC7A10Q9NS82 523 aa12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 PIGYQ3MUY2 71 aa12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 FDX2Q6P4F2 183 aa12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 DHRS13Q6UX07 377 aa12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 RSPO3Q9BXY4 272 aaPredicted RBP12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 RAC1P63000 192 aa12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 OR2M3Q8NG83 312 aa12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 KCNE4Q8WWG9 221 aa12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 MSI2Q96DH6 328 aaKnown RBP12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 SRD5A3Q9H8P0 318 aa12.69□□□□□ -0.38
RPRD1A-202ENST00000399022 A0A1W2PR77 199 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 TMEM14DPA8MWL7 114 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 TIMM8AO60220 97 aaPredicted RBP12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 TNFSF15O95150 251 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 SOD3P08294 240 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 FAM157CP0CG43 387 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 HINT1P49773 126 aaPredicted RBP12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 MEF2BQ02080 365 aaPredicted RBP12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 STPG1Q5TH74 334 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 PRR27Q6MZM9 219 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 OR1K1Q8NGR3 316 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 FGF11Q92914 225 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 TUBD1Q9UJT1 453 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 TIAF1O95411 115 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 ISG15P05161 165 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 TCL1AP56279 114 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 IGLV3-21P80748 117 aaPredicted RBP12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 COL10A1Q03692 680 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 HLA-DRB5Q30154 266 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 HIST3H2BBQ8N257 126 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 CLDN23Q96B33 292 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 SCN8AQ9UQD0 1980 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 ZNHIT1O43257 154 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 IGKV3-11P04433 115 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 HOXA6P31267 233 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 IER3P46695 156 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 THBS3P49746 956 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 SPINK14Q6IE38 97 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 GTF2H5Q6ZYL4 71 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms