RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 MTCL1Q9Y4B5 1905 aaKnown RBP8.2□□□□□ -1.1
ATL3-201ENST00000398868 EPPINO95925 133 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 FBP1P09467 338 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 PF4V1P10720 104 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 DLX1P56177 255 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 MDP1Q86V88 176 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 GPHA2Q96T91 129 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 CCL13Q99616 98 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 TMEFF2Q9UIK5 374 aaPredicted RBP8.2□□□□□ -1.1
ATL3-201ENST00000398868 CTLA4P16410 223 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 ATP5J2P56134 94 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 CD81P60033 236 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 TMEM255AQ5JRV8 349 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 LILRA6Q6PI73 481 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 C17orf47Q8NEP4 570 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 STAG3L2P0CL84 134 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 RBPMS2Q6ZRY4 209 aaKnown RBP8.2□□□□□ -1.1
ATL3-201ENST00000398868 SLC22A18ASQ8N1D0 253 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 TTTY12Q9BZ98 90 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 ZNF256Q9Y2P7 627 aaPredicted RBP8.2□□□□□ -1.1
ATL3-201ENST00000398868 TMED3Q9Y3Q3 217 aa8.2□□□□□ -1.1
ATL3-201ENST00000398868 SRSF10O75494 262 aaKnown RBP8.19□□□□□ -1.1
ATL3-201ENST00000398868 REG1AP05451 166 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 PRR35P0CG20 571 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 ADIPOQQ15848 244 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 DCAF10Q5QP82 559 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 ZAR1Q86SH2 424 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 CA10Q9NS85 328 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 DTX4Q9Y2E6 619 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 RAXQ9Y2V3 346 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 PKD1L3Q7Z443 1732 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 TCF20Q9UGU0 1960 aaKnown RBP8.19□□□□□ -1.1
ATL3-201ENST00000398868 LANCL1O43813 399 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 ZIC3O60481 467 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 TSPAN13O95857 204 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 SP9P0CG40 484 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 MGAT2Q10469 447 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 EIF3IQ13347 325 aaKnown RBP8.19□□□□□ -1.1
ATL3-201ENST00000398868 RHBDD2Q6NTF9 364 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 CLEC18BQ6UXF7 455 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 TBC1D26Q86UD7 250 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 CHAC2Q8WUX2 184 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 NEIL1Q96FI4 390 aaPredicted RBP8.19□□□□□ -1.1
ATL3-201ENST00000398868 TGIF2-C20orf24A0A0A6YYL0 155 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 PLPP3O14495 311 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 GFRA1P56159 465 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 LOXL3P58215 753 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 ZNF628Q5EBL2 1059 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 EMC4Q5J8M3 183 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 NUFIP2Q7Z417 695 aaKnown RBP8.19□□□□□ -1.1
ATL3-201ENST00000398868 EIF4E3Q8N5X7 224 aaKnown RBP8.19□□□□□ -1.1
ATL3-201ENST00000398868 OR4F17Q8NGA8 305 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 ZNF418Q8TF45 676 aaPredicted RBP8.19□□□□□ -1.1
ATL3-201ENST00000398868 DNAJB12Q9NXW2 375 aaKnown RBP8.19□□□□□ -1.1
ATL3-201ENST00000398868 ZDBF2Q9HCK1 2354 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 IGHV3OR16-13A0A075B7E8 117 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 IGHV3-74A0A0B4J1X5 117 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 FAM181BA6NEQ2 426 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 CHST1O43916 411 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 INHBBP09529 407 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 CDCP2Q5VXM1 449 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 LEMD1Q68G75 181 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 OR8B12Q8NGG6 310 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 OR2A5Q96R48 311 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 VSIG4Q9Y279 399 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 C16orf97H3BN30 126 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 C1QCP02747 245 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 AREGP15514 252 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 HTN3P15516 51 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 ANKRD55Q3KP44 614 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 ZNF826PQ6ZT77 177 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 SPAG8Q99932 426 aaPredicted RBP8.19□□□□□ -1.1
ATL3-201ENST00000398868 MARVELD1Q9BSK0 173 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 CXXC4Q9H2H0 198 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 KCNMB2Q9Y691 235 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 ISLRO14498 428 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 KLK2P20151 261 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 FAM3BP58499 235 aaPredicted RBP8.19□□□□□ -1.1
ATL3-201ENST00000398868 LINC00299Q6ZSB3 139 aa8.19□□□□□ -1.1
ATL3-201ENST00000398868 IGHV3-49A0A0A0MS15 119 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 ASPDHA6ND91 283 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 CORTO00230 105 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 FAM157CP0CG43 387 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 ZIC1Q15915 447 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 MYOZ3Q8TDC0 251 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 HDHD3Q9BSH5 251 aaPredicted RBP8.18□□□□□ -1.1
ATL3-201ENST00000398868 WDR13Q9H1Z4 485 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 SLC25A19Q9HC21 320 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 CLN8Q9UBY8 286 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 RGPD4Q7Z3J3 1758 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 ZDHHC22Q8N966 263 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 PITPNC1Q9UKF7 332 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 DEDDO75618 318 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 PLAUP00749 431 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 CD82P27701 267 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 SLC25A30Q5SVS4 291 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 FHL5Q5TD97 284 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 LDLRAD3Q86YD5 345 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 OR2Y1Q8NGV0 311 aa8.18□□□□□ -1.1
ATL3-201ENST00000398868 OTOSQ8NHW6 89 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms