RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 P2RX4Q99571 388 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 LRFN3Q9BTN0 628 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 NPIPB13A6NJU9 1138 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 NPIPB4C9JG80 1138 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 F8VVB4 439 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 F8VWA3 439 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 COX7A2P2O60397 106 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 GAB4Q2WGN9 574 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 CXorf67Q86X51 503 aaPredicted RBP9.62□□□□□ -0.87
HPS4-202ENST00000398145 MEX3AA1L020 520 aaKnown RBP9.62□□□□□ -0.87
HPS4-202ENST00000398145 SLC22A20A6NK97 555 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 C5orf67F2Z3F1 127 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 FREM3P0C091 2139 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 ACER2Q5QJU3 275 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 SMIM15Q7Z3B0 74 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 ACY3Q96HD9 319 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 FAM173AQ9BQD7 235 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 AURKAIP1Q9NWT8 199 aaPredicted RBP9.62□□□□□ -0.87
HPS4-202ENST00000398145 ZNF646O15015 1829 aaPredicted RBP9.61□□□□□ -0.87
HPS4-202ENST00000398145 DEFB108AA8MXU0 73 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 SRSF3P84103 164 aaKnown RBP9.61□□□□□ -0.87
HPS4-202ENST00000398145 HLA-DRB5Q30154 266 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 PTCRAQ6ISU1 281 aaPredicted RBP9.61□□□□□ -0.87
HPS4-202ENST00000398145 ZNF343Q6P1L6 599 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 TIPARPQ7Z3E1 657 aaKnown RBP9.61□□□□□ -0.87
HPS4-202ENST00000398145 REC114Q7Z4M0 266 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 LRRC75AQ8NAA5 344 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 OR5A2Q8NGI9 324 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 STARD4Q96DR4 205 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 LRRC30A6NM36 301 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 H0Y980 276 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 DNPH1O43598 174 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 IGHV4-34P06331 123 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 IL3RAP26951 378 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 EIF3IQ13347 325 aaKnown RBP9.61□□□□□ -0.87
HPS4-202ENST00000398145 GAMTQ14353 236 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 TMEM187Q14656 261 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 RNASEKQ6P5S7 137 aaKnown RBP9.61□□□□□ -0.87
HPS4-202ENST00000398145 BIVMQ86UB2 503 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 LRP11Q86VZ4 500 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 Q96M66 194 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 PCGF1Q9BSM1 259 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 SH2D2AQ9NP31 389 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 CRYAAP02489 173 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 PAX5Q02548 391 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 COTL1Q14019 142 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 HIKESHIQ53FT3 197 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 ARTNQ5T4W7 220 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 GINS3Q9BRX5 216 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 AUP1Q9Y679 476 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 WDR81Q562E7 1941 aa9.61□□□□□ -0.87
HPS4-202ENST00000398145 H0YIZ8 118 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 IGHMP01871 453 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 IGFBP3P17936 291 aaPredicted RBP9.6□□□□□ -0.87
HPS4-202ENST00000398145 RNPS1Q15287 305 aaKnown RBP9.6□□□□□ -0.87
HPS4-202ENST00000398145 ACSM6Q6P461 480 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 WDR74Q6RFH5 385 aaPredicted RBP9.6□□□□□ -0.87
HPS4-202ENST00000398145 ZNF600Q6ZNG1 722 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 SLC22A18ASQ8N1D0 253 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 SCCPDHQ8NBX0 429 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 VN1R17PQ8TDU5 208 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 TWSG1Q9GZX9 223 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 TRAV39A0A0B4J263 110 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 A0A1B0GV90 55 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 DBX1A6NMT0 343 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 C17orf51A8MQB3 221 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 ZNF735P0CB33 412 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 SPINK2P20155 84 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 S100A7P31151 101 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 PMELP40967 661 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 FOXL2P58012 376 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 SPRED2Q7Z698 418 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 MRGPRDQ8TDS7 321 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 CEP250Q9BV73 2442 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 ZNF891A8MT65 544 aaPredicted RBP9.6□□□□□ -0.87
HPS4-202ENST00000398145 E9PQ18 207 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 CCL3P10147 92 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 WDR25Q64LD2 544 aaPredicted RBP9.6□□□□□ -0.87
HPS4-202ENST00000398145 HLA-CQ95604 372 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 RAB24Q969Q5 203 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 RTBDNQ9BSG5 229 aaPredicted RBP9.6□□□□□ -0.87
HPS4-202ENST00000398145 PMS2P1A4D2B8 440 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 J3QT63 122 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 SCTP09683 121 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 DEFA4P12838 97 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 HOXA5P20719 270 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.6□□□□□ -0.87
HPS4-202ENST00000398145 CPEB3Q8NE35 698 aaKnown RBP9.6□□□□□ -0.87
HPS4-202ENST00000398145 ZNF596Q8TC21 504 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 BOD1Q96IK1 185 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 ZNF835Q9Y2P0 537 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 GOLT1BQ9Y3E0 138 aa9.6□□□□□ -0.87
HPS4-202ENST00000398145 LOC101059948A0A1B0GTJ6 334 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 LOC102723971A0A1B0GUV8 181 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 SNURFLB1AK76 121 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 IGKV3-11P04433 115 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 UCP3P55916 312 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 SP7Q8TDD2 431 aaPredicted RBP9.59□□□□□ -0.87
HPS4-202ENST00000398145 GALNT14Q96FL9 552 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 GPR35Q9HC97 309 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms