RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 CEACAM3P40198 252 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 MNDAP41218 407 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 TAS2R43P59537 309 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 CD83Q01151 205 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 PAX5Q02548 391 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 MADCAM1Q13477 382 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 MED21Q13503 144 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 MPV17LQ2QL34 196 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 ACSM3Q53FZ2 586 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 LIPKQ5VXJ0 399 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 C11orf88Q6PI97 169 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 CENPVQ7Z7K6 275 aaPredicted RBP9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 MOB3BQ86TA1 216 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 NDUFA11Q86Y39 141 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 C5orf56Q8N8D9 126 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 Q96M66 194 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 C8orf4Q9NR00 106 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 GFOD1Q9NXC2 390 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 MOB4Q9Y3A3 225 aa9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 AMMECR1Q9Y4X0 333 aaPredicted RBP9.2□□□□□ -0.94
HLA-DQA1-203ENST00000395363 A0A0A6YYD4 124 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 TCRBV4S1A1TA0A5B7 111 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 VSIG8P0DPA2 414 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 PPP1CCP36873 323 aaKnown RBP9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 KCNJ3P48549 501 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 UNC119Q13432 240 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 GPR50Q13585 617 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 IRF3Q14653 427 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 P2RY14Q15391 338 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 MED22Q15528 200 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 ZNF439Q8NDP4 499 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 OR52L2PQ8NGH6 319 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 MRPL30Q8TCC3 161 aaKnown RBP9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 DUX3Q96PT4 197 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 SULT4A1Q9BR01 284 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 PARP12Q9H0J9 701 aaKnown RBP9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 TRAPPC2LQ9UL33 140 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 ERGIC3Q9Y282 383 aa9.19□□□□□ -0.94
HLA-DQA1-203ENST00000395363 MCRIP1C9JLW8 97 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 HSMCR30P0CW71 290 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 SNRPBP14678 240 aaKnown RBP9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 CLDN12P56749 244 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 SLC35A2P78381 396 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 PLA2G7Q13093 441 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 SPHARQ15513 63 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 LINC01559Q495D7 138 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 CT45A1Q5HYN5 189 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 CCDC144NLQ6NUI1 221 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 UNQ9370/PRO34162Q6UXP9 181 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 TMEM91Q6ZNR0 172 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 C16orf82Q7Z2V1 217 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 C6orf201Q7Z4U5 140 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 CEACAM19Q7Z692 300 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 LINC00596Q86U02 117 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 CT45A3Q8NHU0 189 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 RTN4IP1Q8WWV3 396 aaPredicted RBP9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 PHF21AQ96BD5 680 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 EAF1Q96JC9 268 aaPredicted RBP9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 HDHD3Q9BSH5 251 aaPredicted RBP9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 FAAP24Q9BTP7 215 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 MND1Q9BWT6 205 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 VCXQ9H320 206 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 NCOR1P1Q9H4R4 102 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 DCLRE1BQ9H816 532 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 GNG12Q9UBI6 72 aa9.18□□□□□ -0.94
HLA-DQA1-203ENST00000395363 OOSP1A8MZH6 123 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 LCE2BO14633 110 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 ZNF780AO75290 641 aaPredicted RBP9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 PDCD6O75340 191 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 FAM106CPP0CH98 169 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 PF4V1P10720 104 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 CNTFRP26992 372 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 CHATP28329 748 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 HTR2CP28335 458 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 OR3A3P47888 321 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 ARHGDIBP52566 201 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 ZNF816Q0VGE8 651 aaPredicted RBP9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 IZUMO2Q6UXV1 221 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 ETV3LQ6ZN32 361 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 ST6GALNAC6Q969X2 333 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 CREB3L1Q96BA8 519 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 AKR1E2Q96JD6 320 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 HSPB9Q9BQS6 159 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 CCDC90BQ9GZT6 254 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 TAF9BQ9HBM6 251 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 TNCP24821 2201 aa9.17□□□□□ -0.94
HLA-DQA1-203ENST00000395363 PSMB11A5LHX3 300 aa9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 NCBP2LA6PVI3 153 aaKnown RBP9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 ORC5O43913 435 aa9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 SC5DO75845 299 aa9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 CD1AP06126 327 aa9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 SLC2A2P11168 524 aaPredicted RBP9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 FUT3P21217 361 aa9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 MYF6P23409 242 aa9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 MAPK3P27361 379 aaPredicted RBP9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 RAB7AP51149 207 aa9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 F2RL1P55085 397 aa9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 GPR176Q14439 515 aa9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 KPRPQ5T749 579 aaPredicted RBP9.16□□□□□ -0.94
HLA-DQA1-203ENST00000395363 FOXB2Q5VYV0 432 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms