RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 BOD1L1Q8NFC6 3051 aa11.4□□□□□ -0.59
NFKB1-202ENST00000394820 AQP7O14520 342 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 YKT6O15498 198 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 DFFBO76075 338 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 SOD3P08294 240 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 CDX1P47902 265 aaPredicted RBP11.39□□□□□ -0.59
NFKB1-202ENST00000394820 PRDX4Q13162 271 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 SLC23A3Q6PIS1 610 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 SNIP1Q8TAD8 396 aaKnown RBP11.39□□□□□ -0.59
NFKB1-202ENST00000394820 MYOZ1Q9NP98 299 aaPredicted RBP11.39□□□□□ -0.59
NFKB1-202ENST00000394820 KCNIP1Q9NZI2 227 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 A0A0G2JMM0 328 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 A0A1W2PPB8 328 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 A0A1W2PRS3 328 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 KIR3DP1A8MWS1 328 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HIST1H2BKO60814 126 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 ACTL6BO94805 426 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HIST1H2BJP06899 126 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HIST1H2BOP23527 126 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 DDTP30046 118 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HIST1H2BBP33778 126 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HIST1H2BDP58876 126 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HIST1H2BCP62807 126 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HIST2H2BEQ16778 126 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.39□□□□□ -0.59
NFKB1-202ENST00000394820 SPINK14Q6IE38 97 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 LHFPL2Q6ZUX7 228 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HIST1H2BHQ93079 126 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HIST1H2BNQ99877 126 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HIST1H2BMQ99879 126 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 VSIRQ9H7M9 311 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HEYLQ9NQ87 328 aaPredicted RBP11.39□□□□□ -0.59
NFKB1-202ENST00000394820 TMEM100Q9NV29 134 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 STARD10Q9Y365 291 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 SYNGR1O43759 233 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 CSRP1P21291 193 aaKnown RBP11.39□□□□□ -0.59
NFKB1-202ENST00000394820 APLNRP35414 380 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 ECI1P42126 302 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 THBS3P49746 956 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 HGFACQ04756 655 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 CLN8Q9UBY8 286 aa11.39□□□□□ -0.59
NFKB1-202ENST00000394820 DSPP15924 2871 aaKnown RBP11.39□□□□□ -0.59
NFKB1-202ENST00000394820 EML6Q6ZMW3 1958 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 CREBBPQ92793 2442 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 PAGE4O60829 102 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 GAPDHP04406 335 aaKnown RBP11.38□□□□□ -0.59
NFKB1-202ENST00000394820 ZNF25P17030 456 aaPredicted RBP11.38□□□□□ -0.59
NFKB1-202ENST00000394820 SUMO3P55854 103 aaPredicted RBP11.38□□□□□ -0.59
NFKB1-202ENST00000394820 PRR31Q5SQ13 230 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 SLC25A47Q6Q0C1 308 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 OR10D3Q8NH80 312 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 OR51I2Q9H344 312 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 POMT1Q9Y6A1 747 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 NGFP01138 241 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 HLA-GP17693 338 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 FGF7P21781 194 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 CEACAM6P40199 344 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 CEBPDP49716 269 aaPredicted RBP11.38□□□□□ -0.59
NFKB1-202ENST00000394820 FUT6P51993 359 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 KRTDAPP60985 99 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 PSG4Q00888 419 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 PMS2CLQ68D20 193 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 ZDHHC23Q8IYP9 409 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 GCNT2Q8N0V5 402 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 SPSB1Q96BD6 273 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 PAM16Q9Y3D7 125 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 IGKV1D-13A0A0B4J2D9 117 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 IGKV1-13P0DP09 117 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 PTGDSP41222 190 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 TCL1AP56279 114 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 OR8G1Q15617 311 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 CARFQ8N187 725 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 Q96M66 194 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 DEFB127Q9H1M4 99 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 GNG12Q9UBI6 72 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 DUSP13Q9UII6 198 aa11.38□□□□□ -0.59
NFKB1-202ENST00000394820 GRIFINA4D1Z8 144 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 OR6C6A6NF89 314 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 AQP7P3A6NL99 342 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 DBX1A6NMT0 343 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 UBE2CO00762 179 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 TFF1P04155 84 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 SRPXP78539 464 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 ZP4Q12836 540 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 PCOLCEQ15113 449 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 TMEM241Q24JQ0 296 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 BSXQ3C1V8 233 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 C16orf82Q7Z2V1 217 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 DEFB123Q8N688 67 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 RBKSQ9H477 322 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 PILRBQ9UKJ0 227 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 CHCHD2Q9Y6H1 151 aaPredicted RBP11.37□□□□□ -0.59
NFKB1-202ENST00000394820 C10orf142B7Z368 130 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 TRDCB7Z8K6 153 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 PRF1P14222 555 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 VDAC1P21796 283 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 QRFPP83859 136 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 FFAR4Q5NUL3 377 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 OR5D13Q8NGL4 314 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 BOD1Q96IK1 185 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms