RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 NHLH2Q02577 135 aa21.6■■□□□ 1.05
SMARCD3-203ENST00000392811 IL22RA2Q969J5 263 aa21.6■■□□□ 1.05
SMARCD3-203ENST00000392811 ARV1Q9H2C2 271 aa21.6■■□□□ 1.05
SMARCD3-203ENST00000392811 CLEC18AA5D8T8 446 aa21.6■■□□□ 1.05
SMARCD3-203ENST00000392811 A6NLC8 198 aa21.6■■□□□ 1.05
SMARCD3-203ENST00000392811 POLR2GP62487 172 aaKnown RBP eCLIP21.6■■□□□ 1.05
SMARCD3-203ENST00000392811 RPRMLQ8N4K4 120 aa21.6■■□□□ 1.05
SMARCD3-203ENST00000392811 RBMXL3Q8N7X1 1067 aaKnown RBP21.6■■□□□ 1.05
SMARCD3-203ENST00000392811 CLEC18CQ8NCF0 446 aa21.6■■□□□ 1.05
SMARCD3-203ENST00000392811 TLNRD1Q9H1K6 362 aa21.6■■□□□ 1.05
SMARCD3-203ENST00000392811 HRH4Q9H3N8 390 aa21.6■■□□□ 1.05
SMARCD3-203ENST00000392811 LUZP4Q9P127 313 aa21.6■■□□□ 1.05
SMARCD3-203ENST00000392811 C1QTNF9BB2RNN3 333 aa21.59■■□□□ 1.05
SMARCD3-203ENST00000392811 HMGN3Q15651 99 aa21.59■■□□□ 1.05
SMARCD3-203ENST00000392811 CXorf66Q5JRM2 361 aaPredicted RBP21.59■■□□□ 1.05
SMARCD3-203ENST00000392811 MBNL2Q5VZF2 373 aaKnown RBP21.59■■□□□ 1.05
SMARCD3-203ENST00000392811 ATRAIDQ6UW56 229 aa21.59■■□□□ 1.05
SMARCD3-203ENST00000392811 OR51H1Q8NH63 302 aa21.59■■□□□ 1.05
SMARCD3-203ENST00000392811 HSPA12AO43301 675 aa21.58■■□□□ 1.05
SMARCD3-203ENST00000392811 IGLV2-14P01704 120 aa21.58■■□□□ 1.05
SMARCD3-203ENST00000392811 SRSF3P84103 164 aaKnown RBP21.58■■□□□ 1.05
SMARCD3-203ENST00000392811 WDR82Q6UXN9 313 aa21.58■■□□□ 1.05
SMARCD3-203ENST00000392811 IL34Q6ZMJ4 242 aa21.58■■□□□ 1.05
SMARCD3-203ENST00000392811 FAM169BQ8N8A8 192 aa21.58■■□□□ 1.05
SMARCD3-203ENST00000392811 UFSP2Q9NUQ7 469 aa21.58■■□□□ 1.05
SMARCD3-203ENST00000392811 BORCS7-ASMTA0A0B4J1R7 106 aa21.58■■□□□ 1.04
SMARCD3-203ENST00000392811 TMEM218A2RU14 115 aa21.58■■□□□ 1.04
SMARCD3-203ENST00000392811 LMO1P25800 156 aa21.58■■□□□ 1.04
SMARCD3-203ENST00000392811 ARHGDIBP52566 201 aa21.58■■□□□ 1.04
SMARCD3-203ENST00000392811 PJVKQ0ZLH3 352 aa21.58■■□□□ 1.04
SMARCD3-203ENST00000392811 MAGT1Q9H0U3 335 aa21.58■■□□□ 1.04
SMARCD3-203ENST00000392811 ABCD4O14678 606 aa21.57■■□□□ 1.04
SMARCD3-203ENST00000392811 DEFA5Q01523 94 aa21.57■■□□□ 1.04
SMARCD3-203ENST00000392811 EWSR1Q01844 656 aaKnown RBP eCLIP21.57■■□□□ 1.04
SMARCD3-203ENST00000392811 ACP7Q6ZNF0 438 aa21.57■■□□□ 1.04
SMARCD3-203ENST00000392811 OR2C3Q8N628 320 aa21.57■■□□□ 1.04
SMARCD3-203ENST00000392811 LRRC46Q96FV0 321 aa21.57■■□□□ 1.04
SMARCD3-203ENST00000392811 ABHD14BQ96IU4 210 aa21.57■■□□□ 1.04
SMARCD3-203ENST00000392811 PARP12Q9H0J9 701 aaKnown RBP21.57■■□□□ 1.04
SMARCD3-203ENST00000392811 FAM24AA6NFZ4 105 aa21.56■■□□□ 1.04
SMARCD3-203ENST00000392811 SSSCA1O60232 199 aa21.56■■□□□ 1.04
SMARCD3-203ENST00000392811 PSG2P11465 335 aa21.56■■□□□ 1.04
SMARCD3-203ENST00000392811 C1orf185Q5T7R7 199 aa21.56■■□□□ 1.04
SMARCD3-203ENST00000392811 ZNF474Q6S9Z5 364 aaPredicted RBP21.56■■□□□ 1.04
SMARCD3-203ENST00000392811 C17orf50Q8WW18 174 aa21.56■■□□□ 1.04
SMARCD3-203ENST00000392811 TMEM30CPA0ZSE6 113 aa21.56■■□□□ 1.04
SMARCD3-203ENST00000392811 HEXAP06865 529 aa21.56■■□□□ 1.04
SMARCD3-203ENST00000392811 PVALBP20472 110 aaPredicted RBP21.56■■□□□ 1.04
SMARCD3-203ENST00000392811 SNIP1Q8TAD8 396 aaKnown RBP21.56■■□□□ 1.04
SMARCD3-203ENST00000392811 GINS3Q9BRX5 216 aa21.56■■□□□ 1.04
SMARCD3-203ENST00000392811 AKAP13Q12802 2813 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 PROB1E7EW31 1015 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 TFF1P04155 84 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 WNT2P09544 360 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 CEACAM6P40199 344 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 ZNF83P51522 516 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 BLOC1S1P78537 153 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 ID3Q02535 119 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 ALKBH2Q6NS38 261 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 WASF3Q9UPY6 502 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 PPP1R3CQ9UQK1 317 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 RBM7Q9Y580 266 aaKnown RBP21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 A0A0G2JRQ6 117 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 IGSF23A1L1A6 192 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 SERPINE2P07093 398 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 CAV2P51636 162 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 C1orf174Q8IYL3 243 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 S100PBPQ96BU1 408 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 AKR1E2Q96JD6 320 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 PARP11Q9NR21 331 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 KCNS2Q9ULS6 477 aa21.55■■□□□ 1.04
SMARCD3-203ENST00000392811 DSPP15924 2871 aaKnown RBP21.54■■□□□ 1.04
SMARCD3-203ENST00000392811 A0A1B0GWJ7 208 aa21.54■■□□□ 1.04
SMARCD3-203ENST00000392811 CRYABP02511 175 aaKnown RBP21.54■■□□□ 1.04
SMARCD3-203ENST00000392811 OR8U9P0C7N5 309 aa21.54■■□□□ 1.04
SMARCD3-203ENST00000392811 ASCL1P50553 236 aa21.54■■□□□ 1.04
SMARCD3-203ENST00000392811 BTNL8Q6UX41 500 aa21.54■■□□□ 1.04
SMARCD3-203ENST00000392811 OR8U1Q8NH10 309 aa21.54■■□□□ 1.04
SMARCD3-203ENST00000392811 TMEM231Q9H6L2 316 aa21.54■■□□□ 1.04
SMARCD3-203ENST00000392811 KCNIP1Q9NZI2 227 aa21.54■■□□□ 1.04
SMARCD3-203ENST00000392811 NXPH3O95157 252 aa21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 PTBP3O95758 552 aaKnown RBP21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 SEC11BP0C7V7 166 aa21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 ADCYAP1P18509 176 aa21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 MSMPQ1L6U9 139 aa21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 Q6ZRG5 221 aa21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 PRR7Q8TB68 274 aa21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 LYRM2Q9NU23 88 aaPredicted RBP21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 VAMP2P63027 116 aa21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 AESQ08117 197 aa21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 EIF2S3LQ2VIR3 472 aaKnown RBP21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 SLC35E4Q6ICL7 350 aa21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 OR1L1Q8NH94 360 aa21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 GPR146Q96CH1 333 aa21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 PLEKHF2Q9H8W4 249 aa21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 FAM212BQ9NTI7 297 aaPredicted RBP21.53■■□□□ 1.04
SMARCD3-203ENST00000392811 SPP1P10451 314 aa21.52■■□□□ 1.04
SMARCD3-203ENST00000392811 EPHA1P21709 976 aa21.52■■□□□ 1.04
SMARCD3-203ENST00000392811 OR3A1P47881 315 aa21.52■■□□□ 1.04
SMARCD3-203ENST00000392811 ID4P47928 161 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms