RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 C12orf77C9JDV5 145 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 F5H0A9 414 aaPredicted RBP8.51□□□□□ -1.05
LTN1-203ENST00000389195 CA11O75493 328 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 RP2O75695 350 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 SCO1O75880 301 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 OR4A8P0C604 315 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 KITLGP21583 273 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 ARHGDIBP52566 201 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 DLX1P56177 255 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 TAGLNQ01995 201 aaKnown RBP8.51□□□□□ -1.05
LTN1-203ENST00000389195 HNF4GQ14541 408 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 TESK1Q15569 626 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 CXorf66Q5JRM2 361 aaPredicted RBP8.51□□□□□ -1.05
LTN1-203ENST00000389195 ZNF497Q6ZNH5 498 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 UBE2J1Q9Y385 318 aaPredicted RBP8.51□□□□□ -1.05
LTN1-203ENST00000389195 LEUTXA8MZ59 168 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 CCL21O00585 134 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 ZNF146Q15072 292 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 NHLRC3Q5JS37 347 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 KRBOX4Q5JUW0 171 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 MBNL2Q5VZF2 373 aaKnown RBP8.51□□□□□ -1.05
LTN1-203ENST00000389195 POC1AQ8NBT0 407 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 LILRB1Q8NHL6 650 aaPredicted RBP8.51□□□□□ -1.05
LTN1-203ENST00000389195 ZC4H2Q9NQZ6 224 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 UBQLN2Q9UHD9 624 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 AMDHD2Q9Y303 409 aa8.51□□□□□ -1.05
LTN1-203ENST00000389195 HMSDA8MTL9 139 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 H3BP45 60 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 IGHV1-46P01743 117 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 MBPP02686 304 aaPredicted RBP8.5□□□□□ -1.05
LTN1-203ENST00000389195 GYPAP02724 150 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 PRDX2P32119 198 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 AKR1C2P52895 323 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 RPS16P62249 146 aaKnown RBP8.5□□□□□ -1.05
LTN1-203ENST00000389195 AKR1C1Q04828 323 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 INO80EQ8NBZ0 244 aaPredicted RBP8.5□□□□□ -1.05
LTN1-203ENST00000389195 RND1Q92730 232 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 SCGB3A2Q96PL1 93 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 GCM1Q9NP62 436 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 DECR2Q9NUI1 292 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 KCNIP3Q9Y2W7 256 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 MAB21L2Q9Y586 359 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.5□□□□□ -1.05
LTN1-203ENST00000389195 RAMP3O60896 148 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 GLRXP35754 106 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 KCNJ3P48549 501 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 HLA-DRB3P79483 266 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 FAM216BQ8N7L0 139 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 CCL17Q92583 94 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 C5orf30Q96GV9 206 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 MEGF10Q96KG7 1140 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 C2orf50Q96LR7 162 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 CCL13Q99616 98 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 RSRP1Q9BUV0 290 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 RAB18Q9NP72 206 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 POLQO75417 2590 aa8.5□□□□□ -1.05
LTN1-203ENST00000389195 RAI1Q7Z5J4 1906 aaPredicted RBP8.49□□□□□ -1.05
LTN1-203ENST00000389195 ST8SIA5O15466 376 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 ADAM20O43506 726 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 PGLYRP1O75594 196 aaPredicted RBP8.49□□□□□ -1.05
LTN1-203ENST00000389195 HBZP02008 142 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 HOXB1P14653 301 aaPredicted RBP8.49□□□□□ -1.05
LTN1-203ENST00000389195 ID4P47928 161 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 POLR2GP62487 172 aaKnown RBP eCLIP8.49□□□□□ -1.05
LTN1-203ENST00000389195 NHLH2Q02577 135 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 ADIPOQQ15848 244 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 Q6ZRM9 215 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 ZNF767PQ75MW2 155 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 TMED6Q8WW62 240 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 ST8SIA2Q92186 375 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 ERGIC1Q969X5 290 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 HES4Q9HCC6 221 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 FAM208BQ5VWN6 2430 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 MALRD1Q5VYJ5 2156 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 TRBV6-7A0A0A0MS04 114 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 FBXO24O75426 580 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 IFNA7P01567 189 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 HLA-GP17693 338 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 TNFAIP6P98066 277 aaPredicted RBP8.49□□□□□ -1.05
LTN1-203ENST00000389195 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A1Q86YD7 464 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 SLC38A6Q8IZM9 456 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 PRR7Q8TB68 274 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 ARL11Q969Q4 196 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 TRAF4Q9BUZ4 470 aaPredicted RBP8.49□□□□□ -1.05
LTN1-203ENST00000389195 PLK3Q9H4B4 646 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 ZDHHC8Q9ULC8 765 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 ZNF835Q9Y2P0 537 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 OR2W1Q9Y3N9 320 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 PLXNB1O43157 2135 aa8.49□□□□□ -1.05
LTN1-203ENST00000389195 KIR2DS1A0A191URI9 304 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 KANTRA0A1W2PQU2 76 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A10PA6NDY2 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A18PA6NE21 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A16PA6NEW6 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A20PA6NIJ5 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A8PA6NJQ4 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A7PA6NKC0 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A22PA8MWA6 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A12PA8MX19 464 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms