RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 CHODLQ9H9P2 273 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 GPN1Q9HCN4 374 aaPredicted RBP22.25■■□□□ 1.15
MSX1-201ENST00000382723 ZNF69Q9UC07 566 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 ECI1P42126 302 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 LRRC10Q5BKY1 277 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 SLC25A42Q86VD7 318 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 RAB1CQ92928 201 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 C14orf79Q96F83 325 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 RTBDNQ9BSG5 229 aaPredicted RBP22.25■■□□□ 1.15
MSX1-201ENST00000382723 ALX4Q9H161 411 aaPredicted RBP22.25■■□□□ 1.15
MSX1-201ENST00000382723 OR6C3Q9NZP0 311 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 KAAG1Q9UBP8 84 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 ZNF221Q9UK13 617 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 DVL1O14640 695 aa22.24■■□□□ 1.15
MSX1-201ENST00000382723 SURF2Q15527 256 aaPredicted RBP22.24■■□□□ 1.15
MSX1-201ENST00000382723 TRAT1Q6PIZ9 186 aa22.24■■□□□ 1.15
MSX1-201ENST00000382723 DRAXINQ8NBI3 349 aaPredicted RBP22.24■■□□□ 1.15
MSX1-201ENST00000382723 SPINT2O43291 252 aa22.23■■□□□ 1.15
MSX1-201ENST00000382723 SSNA1O43805 119 aa22.23■■□□□ 1.15
MSX1-201ENST00000382723 GZMHP20718 246 aa22.23■■□□□ 1.15
MSX1-201ENST00000382723 H1FOOQ8IZA3 346 aaPredicted RBP22.23■■□□□ 1.15
MSX1-201ENST00000382723 NEURL2Q9BR09 285 aa22.23■■□□□ 1.15
MSX1-201ENST00000382723 C14orf166Q9Y224 244 aaKnown RBP22.23■■□□□ 1.15
MSX1-201ENST00000382723 C15orf65H3BRN8 121 aa22.23■■□□□ 1.15
MSX1-201ENST00000382723 TUSC2O75896 110 aa22.23■■□□□ 1.15
MSX1-201ENST00000382723 FSTL3O95633 263 aa22.23■■□□□ 1.15
MSX1-201ENST00000382723 CEACAM6P40199 344 aa22.23■■□□□ 1.15
MSX1-201ENST00000382723 LTC4SQ16873 150 aa22.23■■□□□ 1.15
MSX1-201ENST00000382723 OR52L2PQ8NGH6 319 aa22.23■■□□□ 1.15
MSX1-201ENST00000382723 H1FXQ92522 213 aaKnown RBP22.23■■□□□ 1.15
MSX1-201ENST00000382723 MED28Q9H204 178 aa22.23■■□□□ 1.15
MSX1-201ENST00000382723 TRGV10A0A0A0MS01 117 aa22.22■■□□□ 1.15
MSX1-201ENST00000382723 HMX3A6NHT5 357 aa22.22■■□□□ 1.15
MSX1-201ENST00000382723 CREBL2O60519 120 aaPredicted RBP22.22■■□□□ 1.15
MSX1-201ENST00000382723 RRAS2P62070 204 aaPredicted RBP22.22■■□□□ 1.15
MSX1-201ENST00000382723 FAM53AQ6NSI3 398 aaPredicted RBP22.22■■□□□ 1.15
MSX1-201ENST00000382723 ZNF295-AS1Q8N0V1 137 aa22.22■■□□□ 1.15
MSX1-201ENST00000382723 MUC20Q8N307 709 aaPredicted RBP22.22■■□□□ 1.15
MSX1-201ENST00000382723 ZFAND1Q8TCF1 268 aa22.22■■□□□ 1.15
MSX1-201ENST00000382723 SECTM1Q8WVN6 248 aa22.22■■□□□ 1.15
MSX1-201ENST00000382723 IGFBPL1Q8WX77 278 aa22.22■■□□□ 1.15
MSX1-201ENST00000382723 NCOR1P1Q9H4R4 102 aa22.22■■□□□ 1.15
MSX1-201ENST00000382723 RDH8Q9NYR8 311 aa22.22■■□□□ 1.15
MSX1-201ENST00000382723 NPIPB11E5RHQ5 1161 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 ZBTB25P24278 435 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 TMEM33P57088 247 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 PPP1R1AQ13522 171 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 CR1LQ2VPA4 569 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 IGHV3-43A0A0B4J1X8 118 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 IGKV1D-13A0A0B4J2D9 117 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 HEXAP06865 529 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 IGHV3-43DP0DP04 118 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 IGKV1-13P0DP09 117 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 VAMP1P23763 118 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 CD300CQ08708 224 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 GNMTQ14749 295 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 ZNF626Q68DY1 528 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 TCF23Q7RTU1 214 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 CHAC2Q8WUX2 184 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 TMEM230Q96A57 120 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 PARP12Q9H0J9 701 aaKnown RBP22.21■■□□□ 1.15
MSX1-201ENST00000382723 C19orf12Q9NSK7 152 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 CALYQ9NYX4 217 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 OR2W1Q9Y3N9 320 aa22.21■■□□□ 1.15
MSX1-201ENST00000382723 HLA-AP01891 365 aaKnown RBP22.2■■□□□ 1.14
MSX1-201ENST00000382723 CTSDP07339 412 aaPredicted RBP22.2■■□□□ 1.14
MSX1-201ENST00000382723 HNRNPCP07910 306 aaKnown RBP eCLIP22.2■■□□□ 1.14
MSX1-201ENST00000382723 RPS2P15880 293 aaKnown RBP22.2■■□□□ 1.14
MSX1-201ENST00000382723 OMGP23515 440 aa22.2■■□□□ 1.14
MSX1-201ENST00000382723 TAS2R31P59538 309 aa22.2■■□□□ 1.14
MSX1-201ENST00000382723 UBE2MP61081 183 aaKnown RBP22.2■■□□□ 1.14
MSX1-201ENST00000382723 RPL31P62899 125 aaKnown RBP22.2■■□□□ 1.14
MSX1-201ENST00000382723 DHRS2Q13268 280 aa22.2■■□□□ 1.14
MSX1-201ENST00000382723 AKAP14Q86UN6 197 aa22.2■■□□□ 1.14
MSX1-201ENST00000382723 NARFLQ9H6Q4 476 aa22.2■■□□□ 1.14
MSX1-201ENST00000382723 OR2S2Q9NQN1 319 aa22.2■■□□□ 1.14
MSX1-201ENST00000382723 USF3Q68DE3 2245 aa22.2■■□□□ 1.14
MSX1-201ENST00000382723 A8MV72 311 aaPredicted RBP22.19■■□□□ 1.14
MSX1-201ENST00000382723 SNRPGP15A8MWD9 76 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 UCP3P55916 312 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 ABCA11PQ4W5N1 156 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 SLC38A6Q8IZM9 456 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 OR10V1Q8NGI7 309 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 ZNF431Q8TF32 576 aaPredicted RBP22.19■■□□□ 1.14
MSX1-201ENST00000382723 NRGNQ92686 78 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 NINJ1Q92982 152 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 SLC5A7Q9GZV3 580 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 OPN4Q9UHM6 478 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 hADV38S2A0JD32 116 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 FCN2Q15485 313 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 PHLDA2Q53GA4 152 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 TMEM128Q5BJH2 165 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 UXS1Q8NBZ7 420 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 TENM4Q6N022 2769 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 KIAA2026Q5HYC2 2103 aa22.19■■□□□ 1.14
MSX1-201ENST00000382723 IGHV4-39P01824 125 aa22.18■■□□□ 1.14
MSX1-201ENST00000382723 PPP1CCP36873 323 aaKnown RBP22.18■■□□□ 1.14
MSX1-201ENST00000382723 GPR6P46095 362 aaPredicted RBP22.18■■□□□ 1.14
MSX1-201ENST00000382723 C17orf58Q2M2W7 97 aa22.18■■□□□ 1.14
MSX1-201ENST00000382723 FAHD2BQ6P2I3 314 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms