RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 TLNRD1Q9H1K6 362 aa18.1■□□□□ 0.49
CNTFR-202ENST00000378980 OR14J1Q9UGF5 321 aa18.1■□□□□ 0.49
CNTFR-202ENST00000378980 CEBPDP49716 269 aaPredicted RBP18.09■□□□□ 0.49
CNTFR-202ENST00000378980 POLR2GP62487 172 aaKnown RBP eCLIP18.09■□□□□ 0.49
CNTFR-202ENST00000378980 BLOC1S1P78537 153 aa18.09■□□□□ 0.49
CNTFR-202ENST00000378980 SRSF3P84103 164 aaKnown RBP18.09■□□□□ 0.49
CNTFR-202ENST00000378980 ZNF718Q3SXZ3 478 aa18.09■□□□□ 0.49
CNTFR-202ENST00000378980 ZNF826PQ6ZT77 177 aa18.09■□□□□ 0.49
CNTFR-202ENST00000378980 BEND4Q6ZU67 534 aa18.09■□□□□ 0.49
CNTFR-202ENST00000378980 OR2C3Q8N628 320 aa18.09■□□□□ 0.49
CNTFR-202ENST00000378980 GINS3Q9BRX5 216 aa18.09■□□□□ 0.49
CNTFR-202ENST00000378980 PARP11Q9NR21 331 aa18.09■□□□□ 0.49
CNTFR-202ENST00000378980 FZR1Q9UM11 496 aa18.09■□□□□ 0.49
CNTFR-202ENST00000378980 IGLV2-14P01704 120 aa18.08■□□□□ 0.49
CNTFR-202ENST00000378980 PVALBP20472 110 aaPredicted RBP18.08■□□□□ 0.49
CNTFR-202ENST00000378980 NBL1P41271 181 aa18.08■□□□□ 0.49
CNTFR-202ENST00000378980 EWSR1Q01844 656 aaKnown RBP eCLIP18.08■□□□□ 0.49
CNTFR-202ENST00000378980 CXorf66Q5JRM2 361 aaPredicted RBP18.08■□□□□ 0.49
CNTFR-202ENST00000378980 MBNL2Q5VZF2 373 aaKnown RBP18.08■□□□□ 0.49
CNTFR-202ENST00000378980 FAM169BQ8N8A8 192 aa18.08■□□□□ 0.49
CNTFR-202ENST00000378980 HEATR1Q9H583 2144 aaKnown RBP18.08■□□□□ 0.49
CNTFR-202ENST00000378980 WNT9BO14905 357 aa18.08■□□□□ 0.48
CNTFR-202ENST00000378980 PSPNO60542 156 aa18.08■□□□□ 0.48
CNTFR-202ENST00000378980 LMO1P25800 156 aa18.08■□□□□ 0.48
CNTFR-202ENST00000378980 FABP6P51161 128 aa18.08■□□□□ 0.48
CNTFR-202ENST00000378980 OR51H1Q8NH63 302 aa18.08■□□□□ 0.48
CNTFR-202ENST00000378980 SLC25A15Q9Y619 301 aa18.08■□□□□ 0.48
CNTFR-202ENST00000378980 HSPA12AO43301 675 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 SSSCA1O60232 199 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 ATG12O94817 140 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 SEC11BP0C7V7 166 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 ADCYAP1P18509 176 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 GCH1P30793 250 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 ARHGDIBP52566 201 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 PRAMEF6Q5VXH4 476 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 BTNL8Q6UX41 500 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 FAM212BQ9NTI7 297 aaPredicted RBP18.07■□□□□ 0.48
CNTFR-202ENST00000378980 KIAA2026Q5HYC2 2103 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 BOD1L1Q8NFC6 3051 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 A6NLC8 198 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 CAV2P51636 162 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 ID3Q02535 119 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 WDR82Q6UXN9 313 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 C1orf174Q8IYL3 243 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 UBALD1Q8TB05 177 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 AKR1E2Q96JD6 320 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 MAGT1Q9H0U3 335 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 MSL2Q9HCI7 577 aa18.07■□□□□ 0.48
CNTFR-202ENST00000378980 ZFHX2Q9C0A1 2572 aaPredicted RBP18.06■□□□□ 0.48
CNTFR-202ENST00000378980 AKAP13Q12802 2813 aa18.06■□□□□ 0.48
CNTFR-202ENST00000378980 PIGBOS1A0A0B4J2F0 54 aa18.06■□□□□ 0.48
CNTFR-202ENST00000378980 TMEM30CPA0ZSE6 113 aa18.06■□□□□ 0.48
CNTFR-202ENST00000378980 IGSF23A1L1A6 192 aa18.06■□□□□ 0.48
CNTFR-202ENST00000378980 FAM24AA6NFZ4 105 aa18.06■□□□□ 0.48
CNTFR-202ENST00000378980 HEXAP06865 529 aa18.06■□□□□ 0.48
CNTFR-202ENST00000378980 SPP1P10451 314 aa18.06■□□□□ 0.48
CNTFR-202ENST00000378980 PSG2P11465 335 aa18.06■□□□□ 0.48
CNTFR-202ENST00000378980 ACP7Q6ZNF0 438 aa18.06■□□□□ 0.48
CNTFR-202ENST00000378980 Q6ZRG5 221 aa18.06■□□□□ 0.48
CNTFR-202ENST00000378980 LYRM2Q9NU23 88 aaPredicted RBP18.06■□□□□ 0.48
CNTFR-202ENST00000378980 FAM215AQ9Y5M1 114 aa18.06■□□□□ 0.48
CNTFR-202ENST00000378980 A0A1B0GWJ7 208 aa18.05■□□□□ 0.48
CNTFR-202ENST00000378980 SERPINE2P07093 398 aa18.05■□□□□ 0.48
CNTFR-202ENST00000378980 F2RL1P55085 397 aa18.05■□□□□ 0.48
CNTFR-202ENST00000378980 TAGLNQ01995 201 aaKnown RBP18.05■□□□□ 0.48
CNTFR-202ENST00000378980 ZNF273Q14593 569 aa18.05■□□□□ 0.48
CNTFR-202ENST00000378980 C10orf91Q5T1B1 145 aa18.05■□□□□ 0.48
CNTFR-202ENST00000378980 A0A0G2JRQ6 117 aa18.05■□□□□ 0.48
CNTFR-202ENST00000378980 MMP9P14780 707 aa18.05■□□□□ 0.48
CNTFR-202ENST00000378980 HOXA4Q00056 320 aaPredicted RBP18.05■□□□□ 0.48
CNTFR-202ENST00000378980 SWI5Q1ZZU3 235 aa18.05■□□□□ 0.48
CNTFR-202ENST00000378980 RBMXL3Q8N7X1 1067 aaKnown RBP18.05■□□□□ 0.48
CNTFR-202ENST00000378980 TSNAXQ99598 290 aaKnown RBP18.05■□□□□ 0.48
CNTFR-202ENST00000378980 NKX6-2Q9C056 277 aaPredicted RBP18.05■□□□□ 0.48
CNTFR-202ENST00000378980 PARP12Q9H0J9 701 aaKnown RBP18.05■□□□□ 0.48
CNTFR-202ENST00000378980 TMEM231Q9H6L2 316 aa18.05■□□□□ 0.48
CNTFR-202ENST00000378980 PLEKHF2Q9H8W4 249 aa18.05■□□□□ 0.48
CNTFR-202ENST00000378980 TREM1Q9NP99 234 aa18.05■□□□□ 0.48
CNTFR-202ENST00000378980 LOC105371267A0A1B0GV96 52 aa18.04■□□□□ 0.48
CNTFR-202ENST00000378980 TSPAN4O14817 238 aa18.04■□□□□ 0.48
CNTFR-202ENST00000378980 KLK10O43240 276 aa18.04■□□□□ 0.48
CNTFR-202ENST00000378980 CEACAM6P40199 344 aa18.04■□□□□ 0.48
CNTFR-202ENST00000378980 VAMP2P63027 116 aa18.04■□□□□ 0.48
CNTFR-202ENST00000378980 SLC35E4Q6ICL7 350 aa18.04■□□□□ 0.48
CNTFR-202ENST00000378980 LYPD6BQ8NI32 183 aa18.04■□□□□ 0.48
CNTFR-202ENST00000378980 PRR7Q8TB68 274 aa18.04■□□□□ 0.48
CNTFR-202ENST00000378980 UFSP2Q9NUQ7 469 aa18.04■□□□□ 0.48
CNTFR-202ENST00000378980 RBM7Q9Y580 266 aaKnown RBP18.04■□□□□ 0.48
CNTFR-202ENST00000378980 PROB1E7EW31 1015 aa18.03■□□□□ 0.48
CNTFR-202ENST00000378980 PITX3O75364 302 aa18.03■□□□□ 0.48
CNTFR-202ENST00000378980 DANCRP0C864 163 aa18.03■□□□□ 0.48
CNTFR-202ENST00000378980 SLC25A6P12236 298 aa18.03■□□□□ 0.48
CNTFR-202ENST00000378980 MUC1P15941 1255 aaPredicted RBP18.03■□□□□ 0.48
CNTFR-202ENST00000378980 EIF2S3LQ2VIR3 472 aaKnown RBP18.03■□□□□ 0.48
CNTFR-202ENST00000378980 RPRMLQ8N4K4 120 aa18.03■□□□□ 0.48
CNTFR-202ENST00000378980 TMEM252Q8N6L7 170 aa18.03■□□□□ 0.48
CNTFR-202ENST00000378980 SLC25A31Q9H0C2 315 aa18.03■□□□□ 0.48
CNTFR-202ENST00000378980 UQCC1Q9NVA1 299 aa18.03■□□□□ 0.48
CNTFR-202ENST00000378980 KCNIP1Q9NZI2 227 aa18.03■□□□□ 0.48
CNTFR-202ENST00000378980 KCNS2Q9ULS6 477 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms