RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 BLOC1S1P78537 153 aa16.25■□□□□ 0.19
PCDHA4-201ENST00000378125 EWSR1Q01844 656 aaKnown RBP eCLIP16.25■□□□□ 0.19
PCDHA4-201ENST00000378125 FAM74A3Q4VXF1 159 aa16.25■□□□□ 0.19
PCDHA4-201ENST00000378125 C11orf53Q8IXP5 236 aa16.25■□□□□ 0.19
PCDHA4-201ENST00000378125 UBAC2Q8NBM4 344 aa16.25■□□□□ 0.19
PCDHA4-201ENST00000378125 HEATR1Q9H583 2144 aaKnown RBP16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 IGHV1-18A0A0C4DH31 117 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 IGSF23A1L1A6 192 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 AHRRA9YTQ3 701 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 CEACAM4O75871 244 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 OR8U9P0C7N5 309 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 MUC1P15941 1255 aaPredicted RBP16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 TESK1Q15569 626 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 OR2C3Q8N628 320 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 OR8U1Q8NH10 309 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 BOD1Q96IK1 185 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 CABLES2Q9BTV7 478 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 ATMQ13315 3056 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 ATG12O94817 140 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 CEACAM6P40199 344 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 ZNF146Q15072 292 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 SWI5Q1ZZU3 235 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 NMSQ5H8A3 153 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 GPR157Q5UAW9 335 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 SAT2Q96F10 170 aaPredicted RBP16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 NKX6-2Q9C056 277 aaPredicted RBP16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 ZNF71Q9NQZ8 489 aaPredicted RBP16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 ZFP57Q9NU63 452 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 TAAR3PQ9P1P4 343 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 GLS2Q9UI32 602 aa16.24■□□□□ 0.19
PCDHA4-201ENST00000378125 SPTBN2O15020 2390 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 H0Y980 276 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 KLK10O43240 276 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 CNOT4O95628 575 aaKnown RBP16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 IGLV2-14P01704 120 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 AESQ08117 197 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 ZNF273Q14593 569 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 BHLHA15Q7RTS1 189 aaPredicted RBP16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 TPRX1Q8N7U7 411 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 TLNRD1Q9H1K6 362 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 RP1L1Q8IWN7 2480 aaPredicted RBP16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 BORCS7-ASMTA0A0B4J1R7 106 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 IGHV2OR16-5A0A0B4J2B6 119 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 A0A1B0GV50 99 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 CST7O76096 145 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 SERPINE2P07093 398 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 VDAC1P21796 283 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 MDH2P40926 338 aaKnown RBP16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 ZNF616Q08AN1 781 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 PUSL1Q8N0Z8 303 aaKnown RBP16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 TMEM217Q8N7C4 229 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 OR5D13Q8NGL4 314 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 SPIN2AQ99865 258 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 SPIN2BQ9BPZ2 258 aa16.23■□□□□ 0.19
PCDHA4-201ENST00000378125 TMEM50AO95807 157 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 CGAP01215 116 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 GCH1P30793 250 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 ZNF83P51522 516 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 VAMP2P63027 116 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 IGF2-ASQ6U949 168 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 IL34Q6ZMJ4 242 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 RNASE11Q8TAA1 199 aaKnown RBP16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 CEP250Q9BV73 2442 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 UQCC1Q9NVA1 299 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 DUSP13Q9UII6 198 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 METRNQ9UJH8 293 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 RNF150Q9ULK6 438 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 DNASE2O00115 360 aaPredicted RBP16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 CHST1O43916 411 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 S100GP29377 79 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 BTNL8Q6UX41 500 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 C1orf162Q8NEQ5 155 aaPredicted RBP16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 OR1L1Q8NH94 360 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 C11orf1Q9H5F2 150 aa16.22■□□□□ 0.19
PCDHA4-201ENST00000378125 CACNA1GO43497 2377 aa16.21■□□□□ 0.19
PCDHA4-201ENST00000378125 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.21■□□□□ 0.19
PCDHA4-201ENST00000378125 TMEM210A6NLX4 147 aa16.21■□□□□ 0.19
PCDHA4-201ENST00000378125 H3BP45 60 aa16.21■□□□□ 0.19
PCDHA4-201ENST00000378125 CEACAM1P13688 526 aa16.21■□□□□ 0.19
PCDHA4-201ENST00000378125 HOXB1P14653 301 aaPredicted RBP16.21■□□□□ 0.19
PCDHA4-201ENST00000378125 PVALBP20472 110 aaPredicted RBP16.21■□□□□ 0.19
PCDHA4-201ENST00000378125 OR3A1P47881 315 aa16.21■□□□□ 0.19
PCDHA4-201ENST00000378125 TMEM88Q6PEY1 159 aa16.21■□□□□ 0.19
PCDHA4-201ENST00000378125 LRP11Q86VZ4 500 aa16.21■□□□□ 0.19
PCDHA4-201ENST00000378125 GPR146Q96CH1 333 aa16.21■□□□□ 0.19
PCDHA4-201ENST00000378125 CXXC4Q9H2H0 198 aa16.21■□□□□ 0.19
PCDHA4-201ENST00000378125 PTBP3O95758 552 aaKnown RBP16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 PRH1P02810 166 aa16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 CD80P33681 288 aa16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 TAGLNQ01995 201 aaKnown RBP16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 ZNF718Q3SXZ3 478 aa16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 WDR82Q6UXN9 313 aa16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 FAM212BQ9NTI7 297 aaPredicted RBP16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 DCHS1Q96JQ0 3298 aa16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 MAP1BP46821 2468 aaKnown RBP16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 OR5H1A6NKK0 313 aa16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 C9JQL5 133 aa16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 TMEM182Q6ZP80 229 aaPredicted RBP16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 TMEM252Q8N6L7 170 aa16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 GINS3Q9BRX5 216 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms